RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 OTPQ5XKR4 325 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 LRFN4Q6PJG9 635 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 ZBTB49Q6ZSB9 765 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.3□□□□□ -0.44
GGA3-216ENST00000583282 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
GGA3-216ENST00000583282 LNX2Q8N448 690 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 SLC37A3Q8NCC5 494 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 C1orf162Q8NEQ5 155 aaPredicted RBP12.3□□□□□ -0.44
GGA3-216ENST00000583282 OR9Q1Q8NGQ5 310 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 OTULINQ96BN8 352 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 NMD3Q96D46 503 aaKnown RBP12.3□□□□□ -0.44
GGA3-216ENST00000583282 WFIKKN1Q96NZ8 548 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 TSSK2Q96PF2 358 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 SLC29A1Q99808 456 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 DCLRE1BQ9H816 532 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 RNPEPL1Q9HAU8 725 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 SLC25A19Q9HC21 320 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 USE1Q9NZ43 259 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 LRRK2Q5S007 2527 aa12.3□□□□□ -0.44
GGA3-216ENST00000583282 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 FAM171A2A8MVW0 826 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 RPL36A-HNRNPH2H7BZ11 118 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 GPANK1O95872 356 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 UBE2NP61088 152 aaKnown RBP12.29□□□□□ -0.44
GGA3-216ENST00000583282 ESRRGP62508 458 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 TAB1Q15750 504 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 ETFDHQ16134 617 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 C10orf128Q5T292 105 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 ACSM5Q6NUN0 579 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 SLC25A47Q6Q0C1 308 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 C22orf34Q6ZV56 151 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 GALNT4Q8N4A0 578 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 PLEKHA8Q96JA3 519 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 RBP7Q96R05 134 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 HDHD5Q9BXW7 423 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 GABARAPL3Q9BY60 117 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 NUAK2Q9H093 628 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 SEC61A2Q9H9S3 476 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 SLC17A5Q9NRA2 495 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 TMEM38BQ9NVV0 291 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 VSX1Q9NZR4 365 aaPredicted RBP12.29□□□□□ -0.44
GGA3-216ENST00000583282 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 ENOPH1Q9UHY7 261 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 KLHL21Q9UJP4 597 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 UGT2A1Q9Y4X1 527 aa12.29□□□□□ -0.44
GGA3-216ENST00000583282 SPTAN1Q13813 2472 aaKnown RBP12.28□□□□□ -0.44
GGA3-216ENST00000583282 OR6C68A6NDL8 312 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 FAM183AA6NL82 134 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 DCTN6O00399 190 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 IDH3BO43837 385 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 GYPBP06028 91 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 THBDP07204 575 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 PYCR1P32322 319 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 POLR2IP36954 125 aaKnown RBP12.28□□□□□ -0.44
GGA3-216ENST00000583282 RAD23AP54725 363 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 PPA1Q15181 289 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 PTGES3Q15185 160 aaKnown RBP12.28□□□□□ -0.44
GGA3-216ENST00000583282 THEM4Q5T1C6 240 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 OR7E24Q6IFN5 339 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 C17orf78Q8N4C9 275 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 NPEPL1Q8NDH3 523 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 FNDC8Q8TC99 324 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 MBOAT4Q96T53 435 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 TEX12Q9BXU0 123 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 TOR3AQ9H497 397 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 MED20Q9H944 212 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 TVP23BQ9NYZ1 205 aa12.28□□□□□ -0.44
GGA3-216ENST00000583282 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 ZAR1LA6NP61 321 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SURF4O15260 269 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 KHDRBS3O75525 346 aaKnown RBP12.27□□□□□ -0.45
GGA3-216ENST00000583282 SNAP29O95721 258 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 HLA-HP01893 362 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 CLUP10909 449 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 CD79AP11912 226 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 PPP3CBP16298 524 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 PEX19P40855 299 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 ZNF83P51522 516 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 ZNF133P52736 654 aaPredicted RBP12.27□□□□□ -0.45
GGA3-216ENST00000583282 CDK5Q00535 292 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SLC34A1Q06495 639 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 NPRL3Q12980 569 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SNAPC1Q16533 368 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SGCAQ16586 387 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 TIMM23BQ5SRD1 257 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SP5Q6BEB4 398 aaPredicted RBP12.27□□□□□ -0.45
GGA3-216ENST00000583282 ZNF787Q6DD87 383 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 PROKR2Q8NFJ6 384 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 OR51L1Q8NGJ5 315 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 NANOS1Q8WY41 292 aaKnown RBP12.27□□□□□ -0.45
GGA3-216ENST00000583282 BCL2L2Q92843 193 aaPredicted RBP12.27□□□□□ -0.45
GGA3-216ENST00000583282 MUCL1Q96DR8 90 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SLC38A2Q96QD8 506 aa12.27□□□□□ -0.45
GGA3-216ENST00000583282 SNX18Q96RF0 628 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms