RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SERPINB5P36952 375 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 RFX3P48380 749 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF136P52737 540 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 CDH6P55285 790 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 PRMT2P55345 433 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 BEX3Q00994 111 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 HMGCS1Q01581 520 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 PAX5Q02548 391 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 SRSF5Q13243 272 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 MADCAM1Q13477 382 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 GGTLC2Q14390 218 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 TTLL9Q3SXZ7 439 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 TMEM179Q6ZVK1 233 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 CTAGE6Q86UF2 777 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 LIX1Q8N485 282 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 SMIM10Q96HG1 83 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 SLC29A1Q99808 456 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 FGF20Q9NP95 211 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 ING4Q9UNL4 249 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 PIKFYVEQ9Y2I7 2098 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CENPJQ9HC77 1338 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 IGLV11-55A0A075B6I3 123 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 A0A096LNJ9 63 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 A0A0B4J2A0 478 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 SMCO3A2RU48 225 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 LRRIQ3A6PVS8 624 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CLOCKO15516 846 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 DFNA5O60443 496 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 UTS2O95399 124 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 TSPAN13O95857 204 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 C6orf47O95873 294 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 ZDHHC11BP0C7U3 371 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 PABPC4LP0CB38 370 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CALM1P0DP23 149 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CALM2P0DP24 149 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CALM3P0DP25 149 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 NSG1P42857 185 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 TMED10P49755 219 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 NUTF2P61970 127 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 SLC7A9P82251 487 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CLINT1Q14677 625 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 MRPL23Q16540 153 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 TMEM255AQ5JRV8 349 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 VAX1Q5SQQ9 334 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 TSPO2Q5TGU0 170 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 RAET1LQ5VY80 246 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 ANKRD26P1Q6NSI1 321 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 LYPD2Q6UXB3 125 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 Q6ZSR3 168 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 STRADAQ7RTN6 431 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 PEX26Q7Z412 305 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 PDIK1LQ8N165 341 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 SLC7A13Q8TCU3 470 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 CD300LFQ8TDQ1 290 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 PIK3IP1Q96FE7 263 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 P2RX4Q99571 388 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 FAM192AQ9GZU8 254 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 ANKRA2Q9H9E1 313 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 RBAKQ9NYW8 714 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 SHPKQ9UHJ6 478 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 KLK12Q9UKR0 248 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 USP47Q96K76 1375 aa2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 TET2Q6N021 2002 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-205ENST00000581383 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 IGLV3-16A0A075B6K0 115 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 OR2AG2A6NM03 316 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ANKRD63C9JTQ0 380 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 CDC7O00311 574 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 AIM2O14862 343 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ICOSLGO75144 302 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 OR2J3O76001 311 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF250P15622 560 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 HRH1P35367 487 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 SSR4P51571 173 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 TGM3Q08188 693 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 TWF1Q12792 350 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 PRPSAP1Q14558 356 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 PON3Q15166 354 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 RCN1Q15293 331 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ZSCAN26Q16670 478 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF493Q6ZR52 646 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 TTC5Q8N0Z6 440 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 GTPBP8Q8N3Z3 284 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 Q8N976 141 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 FBXL13Q8NEE6 735 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 OR7G2Q8NG99 324 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 OR10R2Q8NGX6 335 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 OR5B3Q8NH48 314 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF502Q8TBZ5 544 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ACMSDQ8TDX5 336 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 ELMO1Q92556 727 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 PKNOX2Q96KN3 472 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 IFI27L2Q9H2X8 130 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 OR51M1Q9H341 326 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 SAMSN1Q9NSI8 373 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 CD84Q9UIB8 345 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 PITPNC1Q9UKF7 332 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 MRPS18BQ9Y676 258 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 WDR62O43379 1518 aa2.96□□□□□ -1.94
SMCHD1-205ENST00000581383 LRP4O75096 1905 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms