RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 FBXO30Q8TB52 745 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 CKAP2Q8WWK9 683 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 BCL2L2Q92843 193 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 ATP6V1E2Q96A05 226 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 TMEM18Q96B42 140 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 TMIGD2Q96BF3 282 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 RNFT2Q96EX2 444 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 OTUB1Q96FW1 271 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 ARL5BQ96KC2 179 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 ARPC5LQ9BPX5 153 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 RBM4BQ9BQ04 359 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 KATNB1Q9BVA0 655 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 EQTNQ9NQ60 294 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 UBQLN4Q9NRR5 601 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 NSMCE4AQ9NXX6 385 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 TAS2R7Q9NYW3 318 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 CRNNQ9UBG3 495 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 VPS29Q9UBQ0 182 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 MRTO4Q9UKD2 239 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 MMP24Q9Y5R2 645 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 NOTCH3Q9UM47 2321 aa5.35□□□□□ -1.55
PPP4R1-216ENST00000580283 GJE1A6NN92 205 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 NPIPB9F8W1W9 429 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 G3V4G9 280 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 KIF2AO00139 706 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 SULT2B1O00204 365 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 PCDH7O60245 1069 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 PEX14O75381 377 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 MRPL33O75394 65 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 OR4F21O95013 312 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 MPZL1O95297 269 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 CRYAAP02489 173 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 C2P06681 752 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 CDH2P19022 906 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 FNTAP49354 379 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 CDH13P55290 713 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 TMEM33P57088 247 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 POU3F1Q03052 451 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 C2orf80Q0P641 193 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 SELENBP1Q13228 472 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 QPRTQ15274 297 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 PPP1R7Q15435 360 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 ATP6AP1LQ52LC2 224 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 FAM71E1Q6IPT2 247 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 ACSM5Q6NUN0 579 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 METTL2BQ6P1Q9 378 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 MISPQ8IVT2 679 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 TEX45Q8NA69 505 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 SETD9Q8NE22 299 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 DNAAF1Q8NEP3 725 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 SELENOMQ8WWX9 145 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 CCT8L2Q96SF2 557 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 CPNE1Q99829 537 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 RSPO3Q9BXY4 272 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 EBPLQ9BY08 206 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 MRPL37Q9BZE1 423 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 ACPTQ9BZG2 426 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 ZNF442Q9H7R0 627 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 ZNF665Q9H7R5 613 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 LZTFL1Q9NQ48 299 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 DDX18Q9NVP1 670 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 SENP1Q9P0U3 644 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 CPSF2Q9P2I0 782 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 MYEF2Q9P2K5 600 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 NLKQ9UBE8 527 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 FBXO9Q9UK97 447 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 FLVCR1Q9Y5Y0 555 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 KCNE3Q9Y6H6 103 aa5.34□□□□□ -1.55
PPP4R1-216ENST00000580283 TET2Q6N021 2002 aaPredicted RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 IGHV2OR16-5A0A0B4J2B6 119 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 GNG14A0A1W2PPG7 69 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 TCRBV9S1A1TA0A576 114 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 SYCE1LA8MT33 242 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 CLDN34H7C241 214 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 MANBAO00462 879 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 PPIHO43447 177 aaKnown RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 KLHL2O95198 593 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 NUDT14O95848 222 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 IGKV3-15P01624 115 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 IGHV2-5P01817 119 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 ANXA4P09525 319 aaPredicted RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 PRPS2P11908 318 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 ACHEP22303 614 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 CRABP2P29373 138 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 TIA1P31483 386 aaKnown RBP eCLIP5.33□□□□□ -1.565e-6■■■■□ 20.5
PPP4R1-216ENST00000580283 SPRP35270 261 aaPredicted RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC1A3P43003 542 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 AMTP48728 403 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 ARL4CP56559 192 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 BAMBIQ13145 260 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC17A1Q14916 467 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 HEPACAMQ14CZ8 416 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC9B1Q4ZJI4 515 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 TECRLQ5HYJ1 363 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 AVPI1Q5T686 147 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 C1QTNF12Q5T7M4 302 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 GRTP1Q5TC63 336 aa5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 C8orf82Q6P1X6 216 aaPredicted RBP5.33□□□□□ -1.56
PPP4R1-216ENST00000580283 RAPH1Q70E73 1250 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms