RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ZNF433Q8N7K0 673 aaPredicted RBP16.84■□□□□ 0.29
LIMD2-209ENST00000580222 SEMA6DQ8NFY4 1073 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 OR52N5Q8NH56 324 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 OR5K1Q8NHB7 308 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 GIPC3Q8TF64 312 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 LIPHQ8WWY8 451 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 PKP2Q99959 881 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 PSD2Q9BQI7 771 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 C1QTNF6Q9BXI9 259 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 SEMA6AQ9H2E6 1030 aa16.84■□□□□ 0.29
LIMD2-209ENST00000580222 PDP1Q9P0J1 537 aaPredicted RBP16.84■□□□□ 0.29
LIMD2-209ENST00000580222 PRKDCP78527 4128 aaKnown RBP16.84■□□□□ 0.29
LIMD2-209ENST00000580222 BLOC1S5-TXNDC5H3BN57 136 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 VAMP5O95183 116 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 ADORA3P0DMS8 318 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF23P17027 643 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 IL2RGP31785 369 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 SLC9A3P48764 834 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 COMPP49747 757 aaPredicted RBP16.83■□□□□ 0.28
LIMD2-209ENST00000580222 P2RY4P51582 365 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 ELF3P78545 371 aaPredicted RBP16.83■□□□□ 0.28
LIMD2-209ENST00000580222 PUDPQ08623 228 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 TMEM108Q6UXF1 575 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 ZER1Q7Z7L7 766 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 OAFQ86UD1 273 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 AQP11Q8NBQ7 271 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 OR13C2Q8NGS9 318 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 GNPDA2Q8TDQ7 276 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 SORCS2Q96PQ0 1159 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 NTN4Q9HB63 628 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 GP6Q9HCN6 339 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 EMC3Q9P0I2 261 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 SLC25A15Q9Y619 301 aa16.83■□□□□ 0.28
LIMD2-209ENST00000580222 TRAV27A0A087WT01 109 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF716A6NP11 495 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 C11orf98E9PRG8 122 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 PLPP3O14495 311 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 CDC42EP2O14613 210 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 AHCYP23526 432 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 FPR3P25089 353 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 SRP14P37108 136 aaKnown RBP16.82■□□□□ 0.28
LIMD2-209ENST00000580222 PDK3Q15120 406 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 CARTPTQ16568 116 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF544Q6NX49 715 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 C1orf94Q6P1W5 598 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 SHQ1Q6PI26 577 aaKnown RBP16.82■□□□□ 0.28
LIMD2-209ENST00000580222 KDM8Q8N371 416 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 ICA1LQ8NDH6 482 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 CENPNQ96H22 339 aaPredicted RBP16.82■□□□□ 0.28
LIMD2-209ENST00000580222 PIMREGQ9BSJ6 248 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 SF3B5Q9BWJ5 86 aaKnown RBP16.82■□□□□ 0.28
LIMD2-209ENST00000580222 BCO1Q9HAY6 547 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 KIF17Q9P2E2 1029 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 MGAT4BQ9UQ53 548 aa16.82■□□□□ 0.28
LIMD2-209ENST00000580222 ARRDC5A6NEK1 342 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 UNC119BA6NIH7 251 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 RNF13O43567 381 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 SERPINI2O75830 405 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 BAG2O95816 211 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 PTAFRP25105 342 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 SLC16A1P53985 500 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 FOXG1P55316 489 aaPredicted RBP16.81■□□□□ 0.28
LIMD2-209ENST00000580222 RPL18Q07020 188 aaKnown RBP16.81■□□□□ 0.28
LIMD2-209ENST00000580222 C1DQ13901 141 aaKnown RBP16.81■□□□□ 0.28
LIMD2-209ENST00000580222 SLC17A1Q14916 467 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 RCN1Q15293 331 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 TAF11Q15544 211 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 SWI5Q1ZZU3 235 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF770Q6IQ21 691 aaPredicted RBP16.81■□□□□ 0.28
LIMD2-209ENST00000580222 P2RY8Q86VZ1 359 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 UEVLDQ8IX04 471 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 HS3ST5Q8IZT8 346 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 PQLC1Q8N2U9 271 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 SVOPLQ8N434 492 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 C3orf56Q8N813 242 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 OR9K2Q8NGE7 335 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 OR51A7Q8NH64 312 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 NRBF2Q96F24 287 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 OXGR1Q96P68 337 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 BPESC1Q9GZL8 116 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 NDEL1Q9GZM8 345 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 TMEFF2Q9UIK5 374 aaPredicted RBP16.81■□□□□ 0.28
LIMD2-209ENST00000580222 HIF3AQ9Y2N7 669 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 ATP23Q9Y6H3 246 aa16.81■□□□□ 0.28
LIMD2-209ENST00000580222 IGKV3D-15A0A087WSY6 115 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 SAC3D1A6NKF1 404 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 G3V2T6 193 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 M0R1B8 84 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 NDUFS8O00217 210 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 GPR171O14626 319 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 RAD51DO75771 328 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 HPRP00739 348 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 GASTP01350 101 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 IGHV3-9P01782 118 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 ZNF43P17038 809 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 AQP2P41181 271 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 GSSP48637 474 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 POU3F1Q03052 451 aaPredicted RBP16.8■□□□□ 0.28
LIMD2-209ENST00000580222 TSPAN31Q12999 210 aa16.8■□□□□ 0.28
LIMD2-209ENST00000580222 ANKDD1AQ495B1 522 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms