RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TACO1Q9BSH4 297 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 EMC6Q9BV81 110 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 TAPBPLQ9BX59 468 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 NMNAT2Q9BZQ4 307 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 KLHL4Q9C0H6 718 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PIGMQ9H3S5 423 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 EGLN3Q9H6Z9 239 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 CACYBPQ9HB71 228 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 NOX3Q9HBY0 568 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 S100A14Q9HCY8 104 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 NANSQ9NR45 359 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 MED29Q9NX70 200 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 MCTS1Q9ULC4 181 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 AURKCQ9UQB9 309 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 TMEM5Q9Y2B1 443 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ADAM18Q9Y3Q7 739 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SAMHD1Q9Y3Z3 626 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 AP4S1Q9Y587 144 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 NOX1Q9Y5S8 564 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 KLF2Q9Y5W3 355 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 U3KQV3 271 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SPG11Q96JI7 2443 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 DSCAML1Q8TD84 2053 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 IGLV1-36A0A0B4J1U3 117 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 UNC119BA6NIH7 251 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CENPBD1B2RD01 187 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 C11orf98E9PRG8 122 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 DCTN6O00399 190 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SOCS2O14508 198 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GPR171O14626 319 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 DVL2O14641 736 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CASQ2O14958 399 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 HNRNPRO43390 633 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 MITFO75030 526 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GMNNO75496 209 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 TRMUO75648 421 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CCNB2O95067 398 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 AGFG2O95081 481 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 PPP1R3DO95685 299 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 PLGP00747 810 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 IGHV3-9P01782 118 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ALPLP05186 524 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SCG5P05408 212 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CD14P08571 375 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ADORA3P0DMS8 318 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GAAP10253 952 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 IFNGR1P15260 489 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 DNAJA1P31689 397 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 UGT2B10P36537 528 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 POLR2IP36954 125 aaKnown RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CD79BP40259 229 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SMSP52788 366 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CASP6P55212 293 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 PER3P56645 1201 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CLDN17P56750 224 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SMIM11AP58511 58 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CDK5Q00535 292 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 FMODQ06828 376 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM27E3Q08E93 113 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 PMS2P3Q13401 168 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 TSC22D1Q15714 1073 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 STK11Q15831 433 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GABRA6Q16445 453 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 RFX4Q33E94 735 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ALG10Q5BKT4 473 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 C10orf128Q5T292 105 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 EEF1A1P5Q5VTE0 462 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 FBXW9Q5XUX1 488 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 HIST2H2BCQ6DN03 193 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A47Q6Q0C1 308 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SMARCD3Q6STE5 483 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC35D2Q76EJ3 337 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 P4HA3Q7Z4N8 544 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NANOGNBQ7Z5D8 188 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GALNT5Q7Z7M9 940 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 LUZP2Q86TE4 346 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OAFQ86UD1 273 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CXorf67Q86X51 503 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 UEVLDQ8IX04 471 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 PQLC1Q8N2U9 271 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 LNX2Q8N448 690 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 LINC00471Q8N535 108 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ARIH2OSQ8N7S6 290 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CNEP1R1Q8N9A8 125 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 AQP11Q8NBQ7 271 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NPEPL1Q8NDH3 523 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 NOXO1Q8NFA2 376 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OR51A7Q8NH64 312 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 OR5K1Q8NHB7 308 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 FGFBP3Q8TAT2 258 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GNPDA2Q8TDQ7 276 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 GIPC3Q8TF64 312 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 IGFBPL1Q8WX77 278 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 BCL2L2Q92843 193 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 RASD2Q96D21 266 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 ZHX1-C8orf76Q96EF9 292 aa3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 CENPNQ96H22 339 aaPredicted RBP3.31□□□□□ -1.88
SMARCE1-215ENST00000578995 LRR1Q96L50 414 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms