RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 THEM4Q5T1C6 240 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 ARIH2OSQ8N7S6 290 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 ZNF519Q8TB69 540 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 NMD3Q96D46 503 aaKnown RBP20.41■□□□□ 0.86
SNF8-217ENST00000576353 LRGUKQ96M69 825 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 TSPAN32Q96QS1 320 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 MAGIXQ9H6Y5 334 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 SIGLEC7Q9Y286 467 aa20.41■□□□□ 0.86
SNF8-217ENST00000576353 CELSR1Q9NYQ6 3014 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 TCRBV5S2A0A599 114 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 UNC119BA6NIH7 251 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 ARID1AO14497 2285 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 GYG2O15488 501 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 BMP4P12644 408 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 CDKN1AP38936 164 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 GIPRP48546 466 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 PTDSS1P48651 473 aaKnown RBP20.4■□□□□ 0.86
SNF8-217ENST00000576353 ERVK-25P63136 954 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 RSRC1Q96IZ7 334 aaKnown RBP20.4■□□□□ 0.86
SNF8-217ENST00000576353 SH3GL3Q99963 347 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 SEC61A2Q9H9S3 476 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 ZNF224Q9NZL3 707 aa20.4■□□□□ 0.86
SNF8-217ENST00000576353 VSTM5A8MXK1 200 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 OR10H3O60404 316 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 SLC2A10O95528 541 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 ZNF14P17017 642 aaPredicted RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 ZNF26P17031 533 aaPredicted RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 NPR2P20594 1047 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 CALCRP30988 508 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 MRPS34P82930 218 aaKnown RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 CHRNB3Q05901 458 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 TRAP1Q12931 704 aaKnown RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 SLC36A2Q495M3 483 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 FAM98BQ52LJ0 330 aaKnown RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 SLC16A14Q7RTX9 510 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 MYPOPQ86VE0 399 aaPredicted RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 NUP37Q8NFH4 326 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 CCDC124Q96CT7 223 aaKnown RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 CLPTM1LQ96KA5 538 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 TRIM15Q9C019 465 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 SIAEQ9HAT2 523 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 NOX3Q9HBY0 568 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 CA10Q9NS85 328 aa20.39■□□□□ 0.85
SNF8-217ENST00000576353 MAP1AP78559 2803 aaPredicted RBP20.39■□□□□ 0.85
SNF8-217ENST00000576353 IGHV2OR16-5A0A0B4J2B6 119 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 XKRYO14609 159 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 AHCYL1O43865 530 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 FOSL1P15407 271 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 GUCA1AP43080 201 aaPredicted RBP20.38■□□□□ 0.85
SNF8-217ENST00000576353 MAGEA2P43356 314 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 HMGA2P52926 109 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 GPR139Q6DWJ6 353 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 C11orf71Q6IPW1 123 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 TMEM53Q6P2H8 277 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 ZER1Q7Z7L7 766 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 NSMAFQ92636 917 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 ZNF75AQ96N20 296 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 KCNN2Q9H2S1 579 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 RNF121Q9H920 327 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 ADAM18Q9Y3Q7 739 aa20.38■□□□□ 0.85
SNF8-217ENST00000576353 USF3Q68DE3 2245 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 SERPINA5P05154 406 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 PATE4P0C8F1 98 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 FPR3P25089 353 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 SERPINF1P36955 418 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 HGFACQ04756 655 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 FMODQ06828 376 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 ETFDHQ16134 617 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 SLC25A47Q6Q0C1 308 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 SMARCD3Q6STE5 483 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 DPY19L2P2Q6ZN68 376 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 FAM122BQ7Z309 247 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 LINC00471Q8N535 108 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 FGFBP3Q8TAT2 258 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 MS4A3Q96HJ5 214 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 Q96M85 177 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 Q96MF0 132 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 ZNF570Q96NI8 536 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 GPX7Q96SL4 187 aaPredicted RBP20.37■□□□□ 0.85
SNF8-217ENST00000576353 GPA33Q99795 319 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 BTBD10Q9BSF8 475 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 CACNG6Q9BXT2 260 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 BARX1Q9HBU1 254 aaPredicted RBP20.37■□□□□ 0.85
SNF8-217ENST00000576353 NRIP3Q9NQ35 241 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 SPEF1Q9Y4P9 236 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 UGT2A1Q9Y4X1 527 aa20.37■□□□□ 0.85
SNF8-217ENST00000576353 PLCE1Q9P212 2302 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 TNFRSF11BO00300 401 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 ACOT8O14734 319 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 RAB39AQ14964 217 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 SGCAQ16586 387 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 CLDN22Q8N7P3 220 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 HTRA1Q92743 480 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 BDH2Q9BUT1 245 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 ZNF442Q9H7R0 627 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 LYVE1Q9Y5Y7 322 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 PMF1-BGLAPU3KQ54 211 aa20.36■□□□□ 0.85
SNF8-217ENST00000576353 HEATR1Q9H583 2144 aaKnown RBP20.36■□□□□ 0.85
SNF8-217ENST00000576353 IGKV1D-43A0A0B4J1Z2 117 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 PTHP01270 115 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms