RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 SELENOPP49908 381 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF133P52736 654 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-209ENST00000573474 GLO1Q04760 184 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 SF3B4Q15427 424 aaKnown RBP eCLIP12.14□□□□□ -0.471e-7■■■■□ 25.6
CCDC40-209ENST00000573474 SYT6Q5T7P8 510 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-209ENST00000573474 LRFN4Q6PJG9 635 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF367Q7RTV3 350 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 GPR141Q7Z602 305 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 ADGRE4PQ86SQ3 457 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 LHFPL3Q86UP9 236 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 SATL1Q86VE3 508 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
CCDC40-209ENST00000573474 GLB1L2Q8IW92 636 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 TIGD4Q8IY51 512 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 C20orf196Q8IYI0 205 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 KLHL36Q8N4N3 616 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
CCDC40-209ENST00000573474 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 TMIGD2Q96BF3 282 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 INTS14Q96SY0 518 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 YIPF3Q9GZM5 350 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 ERVK13-1Q9NX77 482 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 NDUFA13Q9P0J0 144 aa12.14□□□□□ -0.47
CCDC40-209ENST00000573474 NOSIPQ9Y314 301 aaKnown RBP12.14□□□□□ -0.47
CCDC40-209ENST00000573474 LSM2Q9Y333 95 aaKnown RBP12.14□□□□□ -0.47
CCDC40-209ENST00000573474 CACNA1GO43497 2377 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 KIAA1549Q9HCM3 1950 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 IGKV1D-43A0A0B4J1Z2 117 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF670-ZNF695F2Z2N8 137 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 TGM6O95932 706 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 TFP02787 698 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 LCKP06239 509 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 YES1P07947 543 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 SFTPCP11686 197 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 PSMB9P28065 219 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 NTF4P34130 210 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 HSF2Q03933 536 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 GALEQ14376 348 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 RAB39AQ14964 217 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 LYPD4Q6UWN0 246 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 TMPRSS11AQ6ZMR5 421 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 P4HA3Q7Z4N8 544 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 FGD2Q7Z6J4 655 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 TUSC5Q8IXB3 177 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 OR5M9Q8NGP3 310 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 OR52N1Q8NH53 320 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 NSMAFQ92636 917 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
CCDC40-209ENST00000573474 COG8Q96MW5 612 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 MYCBPQ99417 103 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-209ENST00000573474 MNTQ99583 582 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 TBX5Q99593 518 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF649Q9BS31 505 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 SLC25A18Q9H1K4 315 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 B3GAT2Q9NPZ5 323 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-209ENST00000573474 CAB39Q9Y376 341 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-209ENST00000573474 CHD8Q9HCK8 2581 aa12.13□□□□□ -0.47
CCDC40-209ENST00000573474 SMIM31A0A1B0GVY4 71 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 A0A1W2PQL4 384 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-209ENST00000573474 OR6C65A6NJZ3 312 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF593O00488 134 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-209ENST00000573474 MRPL33O75394 65 aaKnown RBP12.12□□□□□ -0.47
CCDC40-209ENST00000573474 SEC14L2O76054 403 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 GPANK1O95872 356 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 HRGP04196 525 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 LAP3P28838 519 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 HCCSP53701 268 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 GP2P55259 537 aaKnown RBP12.12□□□□□ -0.47
CCDC40-209ENST00000573474 WNT4P56705 351 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 ZNF85Q03923 595 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 KLRB1Q12918 225 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 SPHARQ15513 63 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 MED22Q15528 200 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 TIGD6Q17RP2 521 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 C10orf128Q5T292 105 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 CDC20BQ86Y33 519 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 SLC26A10Q8NG04 563 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 OR13F1Q8NGS4 319 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 OR6N2Q8NGY6 317 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 SMAP2Q8WU79 429 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-209ENST00000573474 WNT2BQ93097 391 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 FOXN4Q96NZ1 517 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 OR5M11Q96RB7 305 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 TRIB1Q96RU8 372 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 ALG8Q9BVK2 526 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 WDR76Q9H967 626 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 MRPL22Q9NWU5 206 aaKnown RBP12.12□□□□□ -0.47
CCDC40-209ENST00000573474 ZMIZ1Q9ULJ6 1067 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 DNAJC13O75165 2243 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
CCDC40-209ENST00000573474 PHYHO14832 338 aa12.11□□□□□ -0.47
CCDC40-209ENST00000573474 ZNHIT1O43257 154 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms