RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 PLGP00747 810 aaPredicted RBP20.56■□□□□ 0.88
VPS53-211ENST00000571805 PGCP20142 388 aa20.56■□□□□ 0.88
VPS53-211ENST00000571805 EFNB2P52799 333 aa20.56■□□□□ 0.88
VPS53-211ENST00000571805 RPL27P61353 136 aaKnown RBP20.56■□□□□ 0.88
VPS53-211ENST00000571805 VWA2Q5GFL6 755 aa20.56■□□□□ 0.88
VPS53-211ENST00000571805 ANKRD16Q6P6B7 361 aa20.56■□□□□ 0.88
VPS53-211ENST00000571805 ELMOD2Q8IZ81 293 aa20.56■□□□□ 0.88
VPS53-211ENST00000571805 METTL12A8MUP2 240 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 H7C417 338 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 NUDT14O95848 222 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 MT-ATP6P00846 226 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 IL5P05113 134 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 GP1BBP13224 206 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 INSM1Q01101 510 aaPredicted RBP20.55■□□□□ 0.88
VPS53-211ENST00000571805 PUDPQ08623 228 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 SNTA1Q13424 505 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 C14orf28Q4W4Y0 310 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 SLC35D2Q76EJ3 337 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 BIVMQ86UB2 503 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 OR51D1Q8NGF3 324 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 MSANTD3Q96H12 275 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 WWTR1Q9GZV5 400 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 CA10Q9NS85 328 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 MRPL22Q9NWU5 206 aaKnown RBP20.55■□□□□ 0.88
VPS53-211ENST00000571805 MTFP1Q9UDX5 166 aa20.55■□□□□ 0.88
VPS53-211ENST00000571805 LMO7DNF2Z398 122 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 PLCXD2Q0VAA5 305 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 EXOSC2Q13868 293 aaKnown RBP20.54■□□□□ 0.88
VPS53-211ENST00000571805 CSRP2Q16527 193 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 TEX30Q5JUR7 227 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 HLA-DQA1Q5Y7H0 255 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 FTMTQ8N4E7 242 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 OR1L3Q8NH93 324 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 C17orf50Q8WW18 174 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 OMA1Q96E52 524 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 TBL1XR1Q9BZK7 514 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 MGAT4CQ9UBM8 478 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 CPAMD8Q8IZJ3 1885 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 IGLV1-36A0A0B4J1U3 117 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 CTAG2O75638 210 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 DXOO77932 396 aaKnown RBP20.54■□□□□ 0.88
VPS53-211ENST00000571805 PNPP00491 289 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 HLA-DQA2P01906 255 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 NSDHLQ15738 373 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 ZNF626Q68DY1 528 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 ASPHD2Q6ICH7 369 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 ADGRG3Q86Y34 549 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 ZNF679Q8IYX0 411 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 RNF128Q8TEB7 428 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 ASB17Q8WXJ9 295 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 CHIAQ9BZP6 476 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 CHRDQ9H2X0 955 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 CDCP1Q9H5V8 836 aa20.54■□□□□ 0.88
VPS53-211ENST00000571805 TMED7-TICAM2A0A0A6YYA0 188 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 GGT3PA6NGU5 568 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SLC25A12O75746 678 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 RBBP9O75884 186 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 ITGA5P08648 1049 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 ABCD3P28288 659 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 HSD11B2P80365 405 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 PPP1R14AQ96A00 147 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 C8orf44Q96CB5 159 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 RBP7Q96R05 134 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SEMA4CQ9C0C4 833 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 CLEC4MQ9H2X3 399 aaPredicted RBP20.53■□□□□ 0.88
VPS53-211ENST00000571805 VSX1Q9NZR4 365 aaPredicted RBP20.53■□□□□ 0.88
VPS53-211ENST00000571805 ZNF69Q9UC07 566 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SLC22A13Q9Y226 551 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 TMED7Q9Y3B3 224 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 RPS10-NUDT3A0A1W2PQS6 291 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 RHPN2P1A8MT19 583 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SNRPGP15A8MWD9 76 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SUSD5O60279 629 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SLC16A7O60669 478 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 SDC3O75056 442 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 OR1D5P58170 312 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 UXS1Q8NBZ7 420 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 TSEN15Q8WW01 171 aaKnown RBP20.53■□□□□ 0.88
VPS53-211ENST00000571805 DAZLQ92904 295 aaKnown RBP20.53■□□□□ 0.88
VPS53-211ENST00000571805 TXNIPQ9H3M7 391 aa20.53■□□□□ 0.88
VPS53-211ENST00000571805 FADS1O60427 444 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 CFDP00746 253 aaPredicted RBP20.52■□□□□ 0.88
VPS53-211ENST00000571805 IFNA7P01567 189 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 CCKBRP32239 447 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 POLR2HP52434 150 aaKnown RBP20.52■□□□□ 0.88
VPS53-211ENST00000571805 PNLIPRP2P54317 469 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 ROM1Q03395 351 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 CFHR1Q03591 330 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 ETFDHQ16134 617 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 PCGF3Q3KNV8 242 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 MEIOBQ8N635 442 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 ZNF441Q8N8Z8 693 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 OR1N1Q8NGS0 311 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 LAMA1P25391 3075 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 CIB4A0PJX0 185 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 PYCARD-AS1I3L0S3 204 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 CREBL2O60519 120 aaPredicted RBP20.52■□□□□ 0.88
VPS53-211ENST00000571805 OR2A4O95047 310 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 CTLA4P16410 223 aa20.52■□□□□ 0.88
VPS53-211ENST00000571805 ENPP1P22413 925 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms