RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ST3GAL3Q11203 375 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC36A2Q495M3 483 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM53Q6P2H8 277 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 LRFN4Q6PJG9 635 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 DPPA2Q7Z7J5 298 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 Q8N3U1 123 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 OR4K5Q8NGD3 323 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 RP9Q8TA86 221 aaKnown RBP10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 ASB10Q8WXI3 467 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 MRPL24Q96A35 216 aaKnown RBP10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF75AQ96N20 296 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 FOXN4Q96NZ1 517 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF347Q96SE7 839 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 SH3GL3Q99963 347 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 BPESC1Q9GZL8 116 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 RNF121Q9H920 327 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 MED4Q9NPJ6 270 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 C20orf141Q9NUB4 165 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 CR1P17927 2039 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 COL6A5A8TX70 2615 aa10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 HEATR1Q9H583 2144 aaKnown RBP10.66□□□□□ -0.7
CTDNEP1-205ENST00000570828 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM129A0AVI4 362 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SYNGR3O43761 229 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 CCDC22O60826 627 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 IFNW1P05000 195 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 ADRA2AP08913 450 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 NR2C1P13056 603 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 EVX1P49640 407 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SELENOWP63302 87 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 MYBPC1Q00872 1141 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 RUNX1T1Q06455 604 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 NRN1LQ496H8 165 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 FAM166AQ6J272 317 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 PODNL1Q6PEZ8 512 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC16A14Q7RTX9 510 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZNF584Q8IVC4 421 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 ZCCHC24Q8N2G6 241 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SYT14Q8NB59 555 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SLC30A7Q8NEW0 376 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 FGFBP3Q8TAT2 258 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 LIPHQ8WWY8 451 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 MCHR2Q969V1 340 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SEPHS2Q99611 448 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 MDFIQ99750 246 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 SYT3Q9BQG1 590 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 MRPL37Q9BZE1 423 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 TPK1Q9H3S4 243 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 C1orf198Q9H425 327 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 TMEM160Q9NX00 188 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 CMTM6Q9NX76 183 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 LPAR3Q9UBY5 353 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 KCNS2Q9ULS6 477 aa10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
CTDNEP1-205ENST00000570828 MXRA5Q9NR99 2828 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 LOC100289279A0A1B0GTE1 492 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 A0A1W2PPW3 197 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 SLC22A23A1A5C7 686 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 HTR3EA5X5Y0 456 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 NPIPB13A6NJU9 1138 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 NPIPB4C9JG80 1138 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 GSTA4O15217 222 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 PIP5K1CO60331 668 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 TRMUO75648 421 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 STAMBPO95630 424 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF682O95780 498 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 PTHP01270 115 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 FAM157CP0CG43 387 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 SAGP10523 405 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 COX4I1P13073 169 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 ACADSP16219 412 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF23P17027 643 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 MDH1P40925 334 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 SLC7A2P52569 658 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 PLP2Q04941 152 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 LIPEQ05469 1076 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 CD47Q08722 323 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 TOP3AQ13472 1001 aaPredicted RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 FXNQ16595 210 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 HIST3H3Q16695 136 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 TBC1D28Q2M2D7 210 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 ALG10Q5BKT4 473 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 RBM15BQ8NDT2 890 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 MOSPD2Q8NHP6 518 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 GEMIN6Q8WXD5 167 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 BPIFA2Q96DR5 249 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 FNDC11Q9BVV2 318 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 BEX2Q9BXY8 128 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 MRPL13Q9BYD1 178 aaKnown RBP10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 SHARPINQ9H0F6 387 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 CHODLQ9H9P2 273 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 CDH20Q9HBT6 801 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 REV1Q9UBZ9 1251 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 FZR1Q9UM11 496 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 A4GNTQ9UNA3 340 aa10.64□□□□□ -0.71
CTDNEP1-205ENST00000570828 ARFGEF3Q5TH69 2177 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 IQCMA0A1B0GVH7 501 aa10.63□□□□□ -0.71
CTDNEP1-205ENST00000570828 GMNCA6NCL1 334 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms