RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CADM1Q9BY67 442 aaKnown RBP6.04□□□□□ -1.44
SMG1-217ENST00000569764 MS4A7Q9GZW8 240 aaPredicted RBP6.04□□□□□ -1.44
SMG1-217ENST00000569764 CSTL1Q9H114 145 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 RHOJQ9H4E5 214 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 PELI2Q9HAT8 420 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 SLC22A11Q9NSA0 550 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 COPZ2Q9P299 210 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 UGT2A1Q9Y4X1 527 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 PCM1Q15154 2024 aa6.04□□□□□ -1.44
SMG1-217ENST00000569764 ZNF106Q9H2Y7 1883 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 PRAMEF33A0A0G2JMD5 474 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ISPDA4D126 451 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 PRAMEF10O60809 474 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SLC25A12O75746 678 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 GOT2P00505 430 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 PRDX3P30048 256 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 CFHR2P36980 270 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ASCL1P50553 236 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 IDH3GP51553 393 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 RPL19P84098 196 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 SELPLGQ14242 412 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZSWIM7Q19AV6 140 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZBTB37Q5TC79 503 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 OR52N2Q8NGI0 321 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZCCHC10Q8TBK6 192 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 APH1AQ96BI3 265 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 PPWD1Q96BP3 646 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 C14orf79Q96F83 325 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 LCORQ96JN0 433 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 ULBP2Q9BZM5 246 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 NUDT4Q9NZJ9 180 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 KLRF1Q9NZS2 232 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 LRRK1Q38SD2 2015 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CCL21O00585 134 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 AIREO43918 545 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SERPINA2P20848 420 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CALCRP30988 508 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CHN2P52757 468 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 LCN2P80188 198 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SLAMF1Q13291 335 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 GPR18Q14330 331 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 RHBDD2Q6NTF9 364 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 RFLNAQ6ZTI6 216 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SNX29P2Q8IUI4 249 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZNF595Q8IYB9 648 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CT55Q8WUE5 264 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 TMEM234Q8WY98 164 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZFP3Q96NJ6 502 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 NPLQ9BXD5 320 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 TBL1XR1Q9BZK7 514 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 XPR1Q9UBH6 696 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FBXL7Q9UJT9 491 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ABCG2Q9UNQ0 655 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ATG2BQ96BY7 2078 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 KIF26AQ9ULI4 1882 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 GAPDHSO14556 408 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 HMGB3O15347 200 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZNF749O43361 778 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 TCF21O43680 179 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 TIMM8AO60220 97 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 REM1O75628 298 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CYP7B1O75881 506 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 RPS3P23396 243 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMG1-217ENST00000569764 DPP4P27487 766 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 YBX1P67809 324 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 ADARB1P78563 741 aaKnown RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 TBR1Q16650 682 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 HSD17B12Q53GQ0 312 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 HIST2H2BCQ6DN03 193 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 HIST2H2BDQ6DRA6 164 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 C1orf87Q8N0U7 546 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 LGI4Q8N135 537 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SNX18Q96RF0 628 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SLC35A5Q9BS91 424 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 BTBD10Q9BSF8 475 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 UBQLN3Q9H347 655 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SLC2A8Q9NY64 477 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 IL17CQ9P0M4 197 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 BTRCQ9Y297 605 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 BTBD3Q9Y2F9 522 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 GVINP1Q7Z2Y8 2422 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM90A18PA6NE21 464 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM90A16PA6NEW6 464 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 NKX6-3A6NJ46 265 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM90A9PA6NNJ1 464 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM90A5PA8MXJ8 464 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 CD3EP07766 207 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM90A15PP0C7V4 464 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 FAM90A14PP0C7W9 464 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ACRV1P26436 265 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 MTNR1AP48039 350 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ZNF140P52738 457 aaPredicted RBP6.03□□□□□ -1.44
SMG1-217ENST00000569764 ACVR1Q04771 509 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 MFAP5Q13361 173 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 GAB1Q13480 694 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 ASAH1Q13510 395 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 AQP6Q13520 282 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 SLC10A1Q14973 349 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 REEP3Q6NUK4 255 aa6.03□□□□□ -1.44
SMG1-217ENST00000569764 MYPOPQ86VE0 399 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms