RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FAM3BP58499 235 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TIGD5Q53EQ6 642 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 LEMD1Q68G75 181 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SENP5Q96HI0 755 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SLC6A18Q96N87 628 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ALG12Q9BV10 488 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 OSER1Q9NX31 292 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 YARS2Q9Y2Z4 477 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 CCDC187A0A096LP49 1063 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TEX50A0A1B0GTY4 177 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 M0R1X1 148 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF16P17020 682 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PMCHP20382 165 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 GRPRP30550 384 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 DIO1P49895 249 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TEAD2Q15562 447 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ARSIQ5FYB1 569 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 EOGTQ5NDL2 527 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 FAM109BQ6ICB4 259 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 OR10A7Q8NGE5 316 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 DCBLD2Q96PD2 775 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TMEFF2Q9UIK5 374 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 KIDINS220Q9ULH0 1771 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 K7EQM0 130 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 CD14P08571 375 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SEC11BP0C7V7 166 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 FPR2P25090 351 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SLC19A1P41440 591 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 CDX1P47902 265 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 HYAL4Q2M3T9 481 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF66Q6ZN08 573 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SUMF1Q8NBK3 374 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TSTD1Q8NFU3 115 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 ATOH1Q92858 354 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 MOGAT1Q96PD6 335 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 NIPSNAP1Q9BPW8 284 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PLEKHF2Q9H8W4 249 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 CSNK1G1Q9HCP0 422 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM184BQ9Y519 407 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 HMX2A2RU54 273 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 FZD9O00144 591 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SELENOFO60613 162 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 DUS4LO95620 317 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 BAXQ07812 192 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 RTL8BQ17RB0 113 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PHF19Q5T6S3 580 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 NKAIN2Q5VXU1 208 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 DHRS7BQ6IAN0 325 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 PRRX2Q99811 253 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 IER2Q9BTL4 223 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 DPH7Q9BTV6 452 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 FKBP11Q9NYL4 201 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 OR5AC2Q9NZP5 309 aa6.56□□□□□ -1.36
CNOT1-216ENST00000569240 MRPS23Q9Y3D9 190 aaKnown RBP6.56□□□□□ -1.36
CNOT1-216ENST00000569240 SLC22A20A6NK97 555 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 FURINP09958 794 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 C6P13671 934 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CRYBB2P43320 205 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 SPINT3P49223 89 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 HSF1Q00613 529 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TRMT12Q53H54 448 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF805Q5CZA5 627 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF787Q6DD87 383 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ETFRF1Q6IPR1 90 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 SLC38A5Q8WUX1 472 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 SHISA4Q96DD7 197 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 ELOVL3Q9HB03 270 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM269A0A1B0GVZ9 245 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 POM121BA6NF01 834 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 RRP8O43159 456 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 HSBP1O75506 76 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 NSA2O95478 260 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CBX7O95931 251 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 HMGN2P05204 90 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CTSAP10619 480 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 USF1P22415 310 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 RPL29P47914 159 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 P2RX1P51575 399 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TLE1Q04724 770 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR1Q1Q15612 314 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 SLC35G1Q2M3R5 365 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 C12orf54Q6X4T0 127 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 SLC35G3Q8N808 338 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 RCBTB1Q8NDN9 531 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM104Q8NE00 496 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR5L1Q8NGL2 311 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR8U1Q8NH10 309 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 IFI44Q8TCB0 444 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 INTS12Q96CB8 462 aaKnown RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 PIK3IP1Q96FE7 263 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 WDR77Q9BQA1 342 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-216ENST00000569240 TM7SF3Q9NS93 570 aa6.55□□□□□ -1.36
CNOT1-216ENST00000569240 CUTCQ9NTM9 273 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms