RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 POFUT2Q9Y2G5 429 aa8.53□□□□□ -1.04
CLK3-220ENST00000567992 TEX13CA0A0J9YWL9 993 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 E7EQL1 145 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 ATP6V1G2-DDX39BF2Z307 99 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 IMPA2O14732 288 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 TXNDC12O95881 172 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 SOD3P08294 240 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 CBR1P16152 277 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 DNASE1P24855 282 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 CALCRP30988 508 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 RPL4P36578 427 aaKnown RBP8.52□□□□□ -1.05
CLK3-220ENST00000567992 ERFP50548 548 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 RASSF2P50749 326 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 IDH3GP51553 393 aaPredicted RBP8.52□□□□□ -1.05
CLK3-220ENST00000567992 CDH11P55287 796 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 TSPAN31Q12999 210 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 KRR1Q13601 381 aaKnown RBP8.52□□□□□ -1.05
CLK3-220ENST00000567992 KEAP1Q14145 624 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 DEFB113Q30KQ7 82 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 PGGHGQ32M88 737 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 RFX4Q33E94 735 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 NRN1LQ496H8 165 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 SMARCD3Q6STE5 483 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 FOXL2NBQ6ZUU3 175 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 PTCHD4Q6ZW05 846 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 TMEM179BQ7Z7N9 219 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 SPATA24Q86W54 205 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 ZNF584Q8IVC4 421 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 SLC22A24Q8N4F4 322 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 PAPD5Q8NDF8 572 aaKnown RBP8.52□□□□□ -1.05
CLK3-220ENST00000567992 FBXW5Q969U6 566 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 ZNF570Q96NI8 536 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 CCL19Q99731 98 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 FOXC2Q99958 501 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 PLA2G12AQ9BZM1 189 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 OR52D1Q9H346 318 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 HEATR1Q9H583 2144 aaKnown RBP8.52□□□□□ -1.05
CLK3-220ENST00000567992 REEP1Q9H902 201 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 MGAT4BQ9UQ53 548 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 SAMHD1Q9Y3Z3 626 aaKnown RBP8.52□□□□□ -1.05
CLK3-220ENST00000567992 U3KQV3 271 aa8.52□□□□□ -1.05
CLK3-220ENST00000567992 SLC22A23A1A5C7 686 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 PRSS37A4D1T9 235 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 A6NIZ1 184 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 ARHGEF9O43307 516 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 FKBP6O75344 327 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CCNB2O95067 398 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 STAMBPO95630 424 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 PPP1R3DO95685 299 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 GASTP01350 101 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CD8AP01732 235 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 TP53P04637 393 aaPredicted RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 MMP7P09237 267 aaPredicted RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 PATE4P0C8F1 98 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 APEHP13798 732 aaKnown RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 PAX1P15863 534 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 ZNF14P17017 642 aaPredicted RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 PAX7P23759 505 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 SDHAP31040 664 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CDAP32320 146 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 ARR3P36575 388 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 IFNGR2P38484 337 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CAPZA2P47755 286 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 ART1P52961 327 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 RAP1BP61224 184 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 RAP1AP62834 184 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 MRPS34P82930 218 aaKnown RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 NAAAQ02083 359 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CD47Q08722 323 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CCNIQ14094 377 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 GK3PQ14409 553 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 MICAQ29983 383 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 GSG1Q2KHT4 349 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 THEM4Q5T1C6 240 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 GPR139Q6DWJ6 353 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 DPY19L2P2Q6ZN68 376 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CCDC36Q8IYA8 594 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 LINC00471Q8N535 108 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 AQP11Q8NBQ7 271 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 OR8D4Q8NGM9 314 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 GNPDA2Q8TDQ7 276 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 NSMAFQ92636 917 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 RADILQ96JH8 1075 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 SAMD8Q96LT4 415 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 SH3GL3Q99963 347 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 DGCR6LQ9BY27 220 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 MMADHCQ9H3L0 296 aaPredicted RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 EGLN3Q9H6Z9 239 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 MOV10Q9HCE1 1003 aaKnown RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 BEX4Q9NWD9 120 aaPredicted RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 CISD1Q9NZ45 108 aaKnown RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 VSX1Q9NZR4 365 aaPredicted RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 ITGB1BP2Q9UKP3 347 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 CDH10Q9Y6N8 788 aa8.51□□□□□ -1.05
CLK3-220ENST00000567992 TEP1Q99973 2627 aaKnown RBP8.51□□□□□ -1.05
CLK3-220ENST00000567992 IGHV2OR16-5A0A0B4J2B6 119 aa8.5□□□□□ -1.05
CLK3-220ENST00000567992 ARRDC5A6NEK1 342 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms