RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FAM157BP0CG42 384 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 ACADSP16219 412 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 COL8A2P25067 703 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 LSP1P33241 339 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 THBS2P35442 1172 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 ZNF133P52736 654 aaPredicted RBP15.71■□□□□ 0.11
USB1-213ENST00000566292 MAPRE2Q15555 327 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 CR1LQ2VPA4 569 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 KRTAP24-1Q3LI83 254 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 NRN1LQ496H8 165 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 LRRC23Q53EV4 343 aaPredicted RBP15.71■□□□□ 0.11
USB1-213ENST00000566292 CYBRD1Q53TN4 286 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 ARMC4Q5T2S8 1044 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 TMEM53Q6P2H8 277 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 SLC16A14Q7RTX9 510 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 HPS1Q92902 700 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 RNF121Q9H920 327 aa15.71■□□□□ 0.11
USB1-213ENST00000566292 CENPBD1B2RD01 187 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 PIP5K1CO60331 668 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 NCR1O76036 304 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 IFNA14P01570 189 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
USB1-213ENST00000566292 MMP7P09237 267 aaPredicted RBP15.7■□□□□ 0.1
USB1-213ENST00000566292 NAT2P11245 290 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 FUT4P22083 530 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 KDELR2P33947 212 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 DAP3P51398 398 aaKnown RBP15.7■□□□□ 0.1
USB1-213ENST00000566292 ZNF84P51523 738 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 ERVS71-1P61550 626 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 SRSF2Q01130 221 aaKnown RBP15.7■□□□□ 0.1
USB1-213ENST00000566292 CCNIQ14094 377 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 LAPTM4AQ15012 233 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 SLC36A2Q495M3 483 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 C10orf128Q5T292 105 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 DPPA2Q7Z7J5 298 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 LRRC18Q8N456 261 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 C1orf159Q96HA4 380 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 OR51B6Q9H340 312 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 GID8Q9NWU2 228 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 GMPR2Q9P2T1 348 aaKnown RBP15.7■□□□□ 0.1
USB1-213ENST00000566292 MED31Q9Y3C7 131 aa15.7■□□□□ 0.1
USB1-213ENST00000566292 IGKV1D-43A0A0B4J1Z2 117 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 SLC2A10O95528 541 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 SNAP29O95721 258 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 CLPTM1O96005 669 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 THRBP10828 461 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 HNF1AP20823 631 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 CDH15P55291 814 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 ALKBH6Q3KRA9 238 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 RGS7BPQ6MZT1 257 aaPredicted RBP15.69■□□□□ 0.1
USB1-213ENST00000566292 HDDC2Q7Z4H3 204 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 MICU2Q8IYU8 434 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 LINC01356Q8N9X3 169 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 PCYOX1LQ8NBM8 494 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 RBM15BQ8NDT2 890 aaKnown RBP15.69■□□□□ 0.1
USB1-213ENST00000566292 OR2T12Q8NG77 320 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 HDAC2Q92769 488 aaKnown RBP15.69■□□□□ 0.1
USB1-213ENST00000566292 RDH5Q92781 318 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 YIPF5Q969M3 257 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 NMD3Q96D46 503 aaKnown RBP15.69■□□□□ 0.1
USB1-213ENST00000566292 TPD52L3Q96J77 140 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 TSPAN32Q96QS1 320 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 C1orf198Q9H425 327 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 CDH20Q9HBT6 801 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 A4GNTQ9UNA3 340 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 UGT2A1Q9Y4X1 527 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 CAPN7Q9Y6W3 813 aa15.69■□□□□ 0.1
USB1-213ENST00000566292 IGLV3-9A0A075B6K5 115 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 A0A1W2PPW3 197 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 SLC22A23A1A5C7 686 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 NPIPB13A6NJU9 1138 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 NPIPB4C9JG80 1138 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 ZNF250P15622 560 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 CDAP32320 146 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 SELENOWP63302 87 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 FMODQ06828 376 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 POU5F2Q8N7G0 328 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 NABP1Q96AH0 204 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 RCN3Q96D15 328 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 PRRC1Q96M27 445 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 TXNIPQ9H3M7 391 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 CMTM6Q9NX76 183 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 TAAR3PQ9P1P4 343 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 ARMCX1Q9P291 453 aa15.68■□□□□ 0.1
USB1-213ENST00000566292 ZNF346Q9UL40 294 aaKnown RBP15.68■□□□□ 0.1
USB1-213ENST00000566292 ELOVL7A1L3X0 281 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 WNT9BO14905 357 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 MGRN1O60291 552 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 PTHP01270 115 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 ACHEP22303 614 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 MAGEB1P43366 347 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 GPR6P46095 362 aaPredicted RBP15.67■□□□□ 0.1
USB1-213ENST00000566292 UCP2P55851 309 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 MRPS34P82930 218 aaKnown RBP15.67■□□□□ 0.1
USB1-213ENST00000566292 GUCY1A3Q02108 690 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 ST3GAL3Q11203 375 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 TBC1D28Q2M2D7 210 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 CPEB3Q8NE35 698 aaKnown RBP15.67■□□□□ 0.1
USB1-213ENST00000566292 OR1J2Q8NGS2 313 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 SYNPRQ8TBG9 265 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms