RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 P4HA3Q7Z4N8 544 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 FGD2Q7Z6J4 655 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ERI1Q8IV48 349 aaKnown RBP16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ACBD7Q8N6N7 88 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 NSMAFQ92636 917 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 FCGR1BQ92637 280 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 RORBQ92753 470 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 TMEM54Q969K7 222 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 INTS12Q96CB8 462 aaKnown RBP16.62■□□□□ 0.25
COMMD4-213ENST00000565834 TRIB1Q96RU8 372 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 BCO1Q9HAY6 547 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 CLCF1Q9UBD9 225 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 CLEC2DQ9UHP7 191 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 NOSIPQ9Y314 301 aaKnown RBP16.62■□□□□ 0.25
COMMD4-213ENST00000565834 AHRRA9YTQ3 701 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 MYL12BO14950 172 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 GPANK1O95872 356 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 PTHP01270 115 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 QDPRP09417 244 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 SFTPCP11686 197 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 PTGS2P35354 604 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ACTC1P68032 377 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ACTA1P68133 377 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 TUSC5Q8IXB3 177 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 SLC35F2Q8IXU6 374 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 C20orf196Q8IYI0 205 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 MCHR2Q969V1 340 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 FOXN4Q96NZ1 517 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 TBX5Q99593 518 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 MND1Q9BWT6 205 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 MARCH7Q9H992 704 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 INPP5EQ9NRR6 644 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 FOXD3Q9UJU5 478 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-213ENST00000565834 BSNQ9UPA5 3926 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 DAPL1A0PJW8 107 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 TFP02787 698 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 LCKP06239 509 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 YES1P07947 543 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 LIMS3P0CW19 117 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 LIMS4P0CW20 117 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 NTF4P34130 210 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 SLC25A47Q6Q0C1 308 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 SLC16A9Q7RTY1 509 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 LHFPL3Q86UP9 236 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 GLB1L2Q8IW92 636 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 TIGD4Q8IY51 512 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 MUL1Q969V5 352 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 INTS14Q96SY0 518 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 CALHM2Q9HA72 323 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 GP6Q9HCN6 339 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 PARPBPQ9NWS1 579 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 ERVK13-1Q9NX77 482 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 CLEC4AQ9UMR7 237 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 SPTA1P02549 2419 aa16.61■□□□□ 0.25
COMMD4-213ENST00000565834 PHF3Q92576 2039 aaKnown RBP16.6■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF99A8MXY4 864 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-213ENST00000565834 MRPL33O75394 65 aaKnown RBP16.6■□□□□ 0.25
COMMD4-213ENST00000565834 OR2T7P0C7T2 308 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 TDGF1P3P51864 188 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 SF3B4Q15427 424 aaKnown RBP eCLIP16.6■□□□□ 0.253e-6■■■■■ 28.5
COMMD4-213ENST00000565834 UBE2UQ5VVX9 321 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF585AQ6P3V2 769 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 LRFN4Q6PJG9 635 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 SATL1Q86VE3 508 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 NANOGP1Q8N7R0 232 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 OR2T27Q8NH04 317 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 SMAP2Q8WU79 429 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-213ENST00000565834 SNRNP40Q96DI7 357 aaKnown RBP16.6■□□□□ 0.25
COMMD4-213ENST00000565834 ULBP2Q9BZM5 246 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 SPENQ96T58 3664 aaKnown RBP16.6■□□□□ 0.25
COMMD4-213ENST00000565834 DOCK7Q96N67 2140 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 ITPR1Q14643 2758 aa16.6■□□□□ 0.25
COMMD4-213ENST00000565834 TMEM129A0AVI4 362 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 DPPA5A6NC42 116 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 INMTO95050 263 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 HSF2Q03933 536 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 MED22Q15528 200 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 ACSF3Q4G176 576 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-213ENST00000565834 PHYHD1Q5SRE7 291 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF367Q7RTV3 350 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 GPR137CQ8N3F9 429 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 SLC26A10Q8NG04 563 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 OR6N2Q8NGY6 317 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 MYCBPQ99417 103 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-213ENST00000565834 SLX1AQ9BQ83 275 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 YIPF3Q9GZM5 350 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 WDR76Q9H967 626 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 B3GAT2Q9NPZ5 323 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 MRPL22Q9NWU5 206 aaKnown RBP16.59■□□□□ 0.25
COMMD4-213ENST00000565834 A0A1W2PPL8 197 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 A0A1W2PQL4 384 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-213ENST00000565834 TPOP07202 933 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 GAAP10253 952 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 PSMB9P28065 219 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 LAP3P28838 519 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF133P52736 654 aaPredicted RBP16.59■□□□□ 0.25
COMMD4-213ENST00000565834 HCCSP53701 268 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 GALEQ14376 348 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 RAB39AQ14964 217 aa16.59■□□□□ 0.25
COMMD4-213ENST00000565834 PRR30Q53SZ7 412 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms