RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 NPR2P20594 1047 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 MYF6P23409 242 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 FMO3P31513 532 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ATP6V1E1P36543 226 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ZNF133P52736 654 aaPredicted RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 CDH11P55287 796 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 SH3BGRP55822 239 aaPredicted RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 ISL1P61371 349 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ADORA2A-AS1P86434 159 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 EFNB1P98172 346 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 GLO1Q04760 184 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 TMED1Q13445 227 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 MED21Q13503 144 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 MAD2L1BPQ15013 274 aaPredicted RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 P2RY6Q15077 328 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 OCLNQ16625 522 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 HIST3H3Q16695 136 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 CEACAM16Q2WEN9 425 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 SLC25A30Q5SVS4 291 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 C10orf128Q5T292 105 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 LRFN4Q6PJG9 635 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 XKRXQ6PP77 449 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 SLC25A47Q6Q0C1 308 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 USP51Q70EK9 711 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 MEPCEQ7L2J0 689 aaKnown RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 GLB1L2Q8IW92 636 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ENTHD1Q8IYW4 607 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 OR6V1Q8N148 313 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 OR10H5Q8NGA6 315 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 OR9Q1Q8NGQ5 310 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 OR6K6Q8NGW6 343 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 PTP4A1Q93096 173 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 UBE2FQ969M7 185 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 CNBD2Q96M20 576 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 TSSK2Q96PF2 358 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 DDOQ99489 341 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 HDHD5Q9BXW7 423 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ANKRD60Q9BZ19 345 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 RACGAP1Q9H0H5 632 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 OPN3Q9H1Y3 402 aaPredicted RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 KCNN2Q9H2S1 579 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 MED20Q9H944 212 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 SEC61A2Q9H9S3 476 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 KCNJ16Q9NPI9 418 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ELOVL5Q9NYP7 299 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 ZNF226Q9NYT6 803 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 TAS2R16Q9NYV7 291 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 MALT1Q9UDY8 824 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDH1-208ENST00000565810 COA3Q9Y2R0 106 aaPredicted RBP6.87□□□□□ -1.31
CDH1-208ENST00000565810 COL6A6A6NMZ7 2263 aa6.87□□□□□ -1.31
CDH1-208ENST00000565810 FREM3P0C091 2139 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 A0A1W2PPL8 197 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 FAM90A27PA6NNH2 459 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 ZNF99A8MXY4 864 aaPredicted RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 TMCC2O75069 709 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 ENTPD6O75354 484 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 GYPBP06028 91 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 GNAO1P09471 354 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 AGAP20933 346 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 IL32P24001 234 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 EDNRAP25101 427 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 LAP3P28838 519 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 GSTT1P30711 240 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 HTR1FP30939 366 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 HOXC12P31275 282 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 PYCR1P32322 319 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 ASCL1P50553 236 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 CSNK2BP67870 215 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 TEKQ02763 1124 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 HSF2Q03933 536 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 FMODQ06828 376 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 CDK5R2Q13319 367 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 APOFQ13790 326 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 ETFDHQ16134 617 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 SGCAQ16586 387 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 PHYHD1Q5SRE7 291 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 C9orf135Q5VTT2 229 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 AADACL4Q5VUY2 407 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 OR7E24Q6IFN5 339 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 ZNF813Q6ZN06 617 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 LIX1LQ8IVB5 337 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 WDFY1Q8IWB7 410 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 ZNF808Q8N4W9 903 aaPredicted RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 OR51L1Q8NGJ5 315 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 LILRB4Q8NHJ6 448 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 KISS1RQ969F8 398 aaPredicted RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 NMD3Q96D46 503 aaKnown RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 ZNF582Q96NG8 517 aaPredicted RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 TEAD3Q99594 435 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 FOXB1Q99853 325 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 USB1Q9BQ65 265 aaKnown RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 CDADC1Q9BWV3 514 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 NMNAT2Q9BZQ4 307 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 SIAEQ9HAT2 523 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 GALNT8Q9NY28 637 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 SCN3BQ9NY72 215 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 DNAJC27Q9NZQ0 273 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms