RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RCE1Q9Y256 329 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 FKBP7Q9Y680 259 aa9.83□□□□□ -0.84
SF3B3-205ENST00000564899 FIGNL2A6NMB9 653 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF724A8MTY0 619 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CENPBD1B2RD01 187 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 LRRTM2O43300 516 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 AHCYL1O43865 530 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SLC16A7O60669 478 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 WDR1O75083 606 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SLC43A1O75387 559 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF432O94892 652 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 NR2C1P13056 603 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 GABRA1P14867 456 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CRABP1P29762 137 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 PYCR1P32322 319 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 PTGER4P35408 488 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 MTNR1AP48039 350 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CSNK1A1P48729 337 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SELENOPP49908 381 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CDH15P55291 814 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SLC35A2P78381 396 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 FMODQ06828 376 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SLC35D3Q5M8T2 416 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 AAED1Q7RTV5 226 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 TUSC5Q8IXB3 177 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 TMEM123Q8N131 208 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 OR6V1Q8N148 313 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 OR51L1Q8NGJ5 315 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 OR6K6Q8NGW6 343 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 OR6N1Q8NGY5 312 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 FAM57AQ8TBR7 257 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 FNDC8Q8TC99 324 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SGCDQ92629 289 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 KISS1RQ969F8 398 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-205ENST00000564899 TSSK2Q96PF2 358 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 RBP7Q96R05 134 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 COPS4Q9BT78 406 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 MRPL13Q9BYD1 178 aaKnown RBP9.82□□□□□ -0.84
SF3B3-205ENST00000564899 NUAK2Q9H093 628 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 DUSP21Q9H596 190 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 RNF122Q9H9V4 155 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CALHM2Q9HA72 323 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 BCO1Q9HAY6 547 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CCNB1IP1Q9NPC3 277 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 PAK1IP1Q9NWT1 392 aaPredicted RBP9.82□□□□□ -0.84
SF3B3-205ENST00000564899 CNOT2Q9NZN8 540 aaKnown RBP9.82□□□□□ -0.84
SF3B3-205ENST00000564899 B9D1Q9UPM9 204 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 MOKQ9UQ07 419 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 NOSIPQ9Y314 301 aaKnown RBP9.82□□□□□ -0.84
SF3B3-205ENST00000564899 SPG11Q96JI7 2443 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 DNAJC13O75165 2243 aa9.82□□□□□ -0.84
SF3B3-205ENST00000564899 IRGMA1A4Y4 181 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 TRIM64A6NGJ6 449 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 FAM171A2A8MVW0 826 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 DCTN6O00399 190 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 RGS10O43665 173 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 MRPL33O75394 65 aaKnown RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 KHDRBS3O75525 346 aaKnown RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 GLCEO94923 617 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 APOL3O95236 402 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 YES1P07947 543 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 PIPP12273 146 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 EDN3P14138 238 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 CTLA4P16410 223 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 GSTT1P30711 240 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 ATP6V1E1P36543 226 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 SLC15A1P46059 708 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 CENPAP49450 140 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 RBPJQ06330 500 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 PIGFQ07326 219 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 RAB40BQ12829 278 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 THEM4Q5T1C6 240 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 C1orf185Q5T7R7 199 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 NSUN5P2Q63ZY6 315 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 SP5Q6BEB4 398 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 RPTNQ6XPR3 784 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 B3GLCTQ6Y288 498 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 ZBTB46Q86UZ6 589 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 C20orf196Q8IYI0 205 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 STX19Q8N4C7 294 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 TSPAN14Q8NG11 270 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 OR51G2Q8NGK0 314 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 ZNRF4Q8WWF5 429 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 WNT2BQ93097 391 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 MYDGFQ969H8 173 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 TMEM54Q969K7 222 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 NMD3Q96D46 503 aaKnown RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 LGALS12Q96DT0 336 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 ZMYND19Q96E35 227 aaPredicted RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 TEAD3Q99594 435 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 CCDC90BQ9GZT6 254 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 RACGAP1Q9H0H5 632 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 GP6Q9HCN6 339 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 GLRX2Q9NS18 164 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 MRPS18AQ9NVS2 196 aaKnown RBP9.81□□□□□ -0.84
SF3B3-205ENST00000564899 FKBP14Q9NWM8 211 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 PARPBPQ9NWS1 579 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 GLTPQ9NZD2 209 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 ERVK-18Q9QC07 812 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms