RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PHC2Q8IXK0 858 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 ARIH2OSQ8N7S6 290 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 NOXO1Q8NFA2 376 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 OR4K5Q8NGD3 323 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 FNDC8Q8TC99 324 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 C10orf82Q8WW14 230 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 ASB10Q8WXI3 467 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 LZICQ8WZA0 190 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 MCHR2Q969V1 340 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 SH3GL3Q99963 347 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
SPG7-210ENST00000564409 BCL2L14Q9BZR8 327 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 RNF121Q9H920 327 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 CDH20Q9HBT6 801 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 SLCO1C1Q9NYB5 712 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 MED31Q9Y3C7 131 aa12.89□□□□□ -0.35
SPG7-210ENST00000564409 LRP5LA4QPB2 252 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 FAM220BPB1ANY3 271 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 PATE4P0C8F1 98 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 KDELR2P33947 212 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 CDH15P55291 814 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 SELENOWP63302 87 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 MRPS34P82930 218 aaKnown RBP12.88□□□□□ -0.35
SPG7-210ENST00000564409 ST3GAL3Q11203 375 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
SPG7-210ENST00000564409 MSMPQ1L6U9 139 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 PCGF3Q3KNV8 242 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 ANKDD1AQ495B1 522 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 CYBRD1Q53TN4 286 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 DEF8Q6ZN54 512 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 ARPINQ7Z6K5 226 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 NKAIN4Q8IVV8 208 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 C1orf174Q8IYL3 243 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
SPG7-210ENST00000564409 OR2T12Q8NG77 320 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 FGFBP3Q8TAT2 258 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 ZNF519Q8TB69 540 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 C11orf40Q8WZ69 217 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 SNX18Q96RF0 628 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 SYT3Q9BQG1 590 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 TPK1Q9H3S4 243 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 SIAEQ9HAT2 523 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 NKIRAS2Q9NYR9 191 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 DUSP13Q9UII6 198 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 CUBNO60494 3623 aa12.88□□□□□ -0.35
SPG7-210ENST00000564409 IGLV3-9A0A075B6K5 115 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 A0A1W2PPW3 197 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 B4DSR2 109 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 TRMUO75648 421 aaKnown RBP12.87□□□□□ -0.35
SPG7-210ENST00000564409 MT-ND5P03915 603 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 F13BP05160 661 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 AQP2P41181 271 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 DVL1P1P54792 670 aaPredicted RBP12.87□□□□□ -0.35
SPG7-210ENST00000564409 UCP2P55851 309 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 KLF3P57682 345 aaPredicted RBP12.87□□□□□ -0.35
SPG7-210ENST00000564409 NKPD1Q17RQ9 610 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 ELFN2Q5R3F8 820 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 ARMC4Q5T2S8 1044 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 FAM205BPQ63HN1 556 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 PFN4Q8NHR9 129 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 SYNPRQ8TBG9 265 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 SNX33Q8WV41 574 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 ZNF347Q96SE7 839 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 TXNIPQ9H3M7 391 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 TMEFF2Q9UIK5 374 aaPredicted RBP12.87□□□□□ -0.35
SPG7-210ENST00000564409 HIF3AQ9Y2N7 669 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
SPG7-210ENST00000564409 LOC100653049A0A140TA62 436 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 ELOVL7A1L3X0 281 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 SASH3O75995 380 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 KRT34O76011 436 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 TFP02787 698 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 HPXP02790 462 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 MMP7P09237 267 aaPredicted RBP12.86□□□□□ -0.35
SPG7-210ENST00000564409 APLNRP35414 380 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 ALDH3B1P43353 468 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 GPR6P46095 362 aaPredicted RBP12.86□□□□□ -0.35
SPG7-210ENST00000564409 OR1E2P47887 323 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 TEKQ02763 1124 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 HSF2Q03933 536 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 RUNX1T1Q06455 604 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 LRRC23Q53EV4 343 aaPredicted RBP12.86□□□□□ -0.35
SPG7-210ENST00000564409 FAM209AQ5JX71 171 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 THEM4Q5T1C6 240 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 LIPNQ5VXI9 398 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 TMEM154Q6P9G4 183 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 MICU2Q8IYU8 434 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 SYT14Q8NB59 555 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 RBP7Q96R05 134 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 SOX7Q9BT81 388 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 HINT3Q9NQE9 182 aaKnown RBP12.86□□□□□ -0.35
SPG7-210ENST00000564409 C20orf141Q9NUB4 165 aa12.86□□□□□ -0.35
SPG7-210ENST00000564409 C17orf100A8MU93 164 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms