RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 BMXP51813 675 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 SLC35A1P78382 337 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 MERTKQ12866 999 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 HAGHQ16775 308 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 TTC19Q6DKK2 380 aaPredicted RBP8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 CEMP1Q6PRD7 247 aaPredicted RBP8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 PAQR4Q8N4S7 273 aaPredicted RBP8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 OR51G2Q8NGK0 314 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 RORBQ92753 470 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 ATP6V1E2Q96A05 226 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 GLIPR2Q9H4G4 154 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF224Q9NZL3 707 aa8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 SPIN1Q9Y657 262 aaPredicted RBP8.46□□□□□ -1.06
HDGFL3-204ENST00000563790 AGRNO00468 2067 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 NUDT19A8MXV4 375 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF99A8MXY4 864 aaPredicted RBP8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 PCDH7O60245 1069 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 DOK2O60496 412 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 RAB36O95755 333 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 SERPINA5P05154 406 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 JUNP05412 331 aaKnown RBP8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 IFI6P09912 130 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 DDCP20711 480 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 PSMB10P40306 273 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 GIPRP48546 466 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 SERPINB8P50452 374 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 SESN3P58005 492 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 RAB1AP62820 205 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 SELPLGQ14242 412 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 CHI3L2Q15782 390 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 CEACAM16Q2WEN9 425 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 CDONQ4KMG0 1287 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 UNC50Q53HI1 259 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 FAM71E1Q6IPT2 247 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 TMEM107Q6UX40 140 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 LYPD2Q6UXB3 125 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 VRK2Q86Y07 508 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 OR5M8Q8NGP6 311 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 TUBGCP3Q96CW5 907 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 ELP4Q96EB1 424 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 GIMAP5Q96F15 307 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 FUT8Q9BYC5 575 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 ACTRT3Q9BYD9 372 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 SLC19A3Q9BZV2 496 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 OR11A1Q9GZK7 315 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 GPR35Q9HC97 309 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 CHRNA9Q9UGM1 479 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 TBK1Q9UHD2 729 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 SNX6Q9UNH7 406 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 PLA2G2DQ9UNK4 145 aa8.45□□□□□ -1.06
HDGFL3-204ENST00000563790 A0A1W2PRD5 423 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 A0A1W2PRF3 423 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 A0A1W2PRM7 423 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 NPIPB8E9PQR5 432 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 IFNL4K9M1U5 179 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 RTL8CO15255 209 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 NKX2-2O95096 273 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 RBP1P09455 135 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 FKBP2P26885 142 aaKnown RBP8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 TACR3P29371 465 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 MPIP34949 423 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 ARL1P40616 181 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 PRKAG1P54619 331 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 PLTPP55058 493 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 UCP2P55851 309 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 ACSM1Q08AH1 577 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 CALCOCO2Q13137 446 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 CAMK2DQ13557 499 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 CBFBQ13951 182 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 NDUFAF6Q330K2 333 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 ZMAT1Q5H9K5 638 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 FAM27D1Q5T7N8 215 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 NIPAL3Q6P499 406 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 KLC3Q6P597 504 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 DCDC5Q6ZRR9 648 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 IGFN1Q86VF2 1251 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 OR6Y1Q8NGX8 325 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 CLHC1Q8NHS4 586 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 GPR151Q8TDV0 419 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF503Q96F45 646 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 TECTBQ96PL2 329 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF382Q96SR6 550 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 EBPLQ9BY08 206 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 SHCBP1LQ9BZQ2 653 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 RNF121Q9H920 327 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 ZDHHC18Q9NUE0 388 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 NDE1Q9NXR1 346 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 TMCO1Q9UM00 188 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 SAR1BQ9Y6B6 198 aa8.44□□□□□ -1.06
HDGFL3-204ENST00000563790 GLRA3O75311 464 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 KCNK2O95069 426 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 SNAP29O95721 258 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 APOBEC1P41238 236 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 NCBP2P52298 156 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 RAB25P57735 213 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 RPL23AP62750 156 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 229.2 ms