RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 LRFN4Q6PJG9 635 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 PTCHD4Q6ZW05 846 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 PQLC1Q8N2U9 271 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 NSMAFQ92636 917 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 MUS81Q96NY9 551 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 RBP7Q96R05 134 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 SMURF2Q9HAU4 748 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 NKX1-2Q9UD57 310 aaPredicted RBP12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 TMEFF2Q9UIK5 374 aaPredicted RBP12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 BAIAP2Q9UQB8 552 aa12.34□□□□□ -0.43
AC009163.3-201ENST00000563554 A0A1W2PPL8 197 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC22A23A1A5C7 686 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 DLGAP1O14490 977 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 IDH3BO43837 385 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 WNT11O96014 354 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 RENP00797 406 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 HIST1H1CP16403 213 aaKnown RBP12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 CRYGSP22914 178 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 IGFBP5P24593 272 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 CAPZA2P47755 286 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 DAPP51397 102 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 ZNF133P52736 654 aaPredicted RBP12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 TUBA1BP68363 451 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 TUBA4AP68366 448 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 PGGHGQ32M88 737 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 THEM4Q5T1C6 240 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC35F1Q5T1Q4 408 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 FBXW10Q5XX13 1052 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 TUBA1AQ71U36 451 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 SSX8Q7RTT4 187 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 IQCF1Q8N6M8 205 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 OR4Q3Q8NH05 313 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 OR4K13Q8NH42 304 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 HTRA1Q92743 480 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 BCL2L2Q92843 193 aaPredicted RBP12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 NMD3Q96D46 503 aaKnown RBP12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 CIB1Q99828 191 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 SYT4Q9H2B2 425 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 RERGLQ9H628 205 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 CHD3Q12873 2000 aaKnown RBP12.33□□□□□ -0.44
AC009163.3-201ENST00000563554 CELSR2Q9HCU4 2923 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 ARPC4-TTLL3A0A0A6YYG9 625 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 IGKV1D-43A0A0B4J1Z2 117 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 A6NNC1 897 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 AHCYL1O43865 530 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 MITFO75030 526 aaPredicted RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 FARS2O95363 451 aaKnown RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 EPHA2P29317 976 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 RCN1Q15293 331 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 ZNF362Q5T0B9 420 aaPredicted RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 KDM4DQ6B0I6 523 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC27A4Q6P1M0 643 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 DNM1P34Q6PK57 102 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 TMEM200AQ86VY9 491 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 PARP8Q8N3A8 854 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 LNX2Q8N448 690 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 OR52E2Q8NGJ4 325 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 NANOS1Q8WY41 292 aaKnown RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 PIK3IP1Q96FE7 263 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 BOD1Q96IK1 185 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 SNX18Q96RF0 628 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 NMNAT3Q96T66 252 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 DDOQ99489 341 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC29A1Q99808 456 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 RBM4BQ9BQ04 359 aaKnown RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 RBM4Q9BWF3 364 aaKnown RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 FN3KQ9H479 309 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 NGBQ9NPG2 151 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 OBP2BQ9NPH6 170 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 VSX1Q9NZR4 365 aaPredicted RBP12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 ENOPH1Q9UHY7 261 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC25A15Q9Y619 301 aa12.32□□□□□ -0.44
AC009163.3-201ENST00000563554 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 EI24O14681 340 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC16A7O60669 478 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 GOSR1O95249 250 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 IFNGP01579 166 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 OR8G3PP0DMU2 310 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 CTLA4P16410 223 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 CDAP32320 146 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 GRK5P34947 590 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 CDKN2AP42771 156 aaKnown RBP12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 PPP2R2BQ00005 443 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 TLE4Q04727 773 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 DAG1Q14118 895 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 GINS1Q14691 196 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 BEX5Q5H9J7 111 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 WDR31Q8NA23 367 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 C9orf16Q9BUW7 83 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 OSBPL10Q9BXB5 764 aa12.31□□□□□ -0.44
AC009163.3-201ENST00000563554 SEC61A2Q9H9S3 476 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms