RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SNX33Q8WV41 574 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 CPNE4Q96A23 557 aaPredicted RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 PNPLA2Q96AD5 504 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 SCMH1Q96GD3 660 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 MEGF10Q96KG7 1140 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 RBP7Q96R05 134 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 INTS14Q96SY0 518 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 TM9SF2Q99805 663 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 SF3B5Q9BWJ5 86 aaKnown RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 NAA50Q9GZZ1 169 aaKnown RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.67□□□□□ -1.021e-11■■■■□ 20.7
UBFD1-202ENST00000563366 ZNF552Q9H707 407 aaPredicted RBP8.67□□□□□ -1.02
UBFD1-202ENST00000563366 MARCH7Q9H992 704 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 SIAEQ9HAT2 523 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 DEPPQ9NTK1 212 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 BABAM2Q9NXR7 383 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 STUB1Q9UNE7 303 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 SSR3Q9UNL2 185 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 DMXL1Q9Y485 3027 aa8.67□□□□□ -1.02
UBFD1-202ENST00000563366 A0A0G2JMM0 328 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 A0A1W2PPB8 328 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 A0A1W2PPW3 197 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 A0A1W2PQL4 384 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 A0A1W2PRS3 328 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 A6NL46 340 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF726A6NNF4 738 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 KIR3DP1A8MWS1 328 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NPIPA2E9PIF3 369 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NPIPA3F8WFD2 350 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NKX2-8O15522 239 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 HLA-DPB1P04440 258 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ADRA2AP08913 450 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ENPP1P22413 925 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 GADD45AP24522 165 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NAA10P41227 235 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 TNFSF10P50591 281 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 AGFG1P52594 562 aaKnown RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 GBX2P52951 348 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 GFRA1P56159 465 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 B3GALT5-AS1P59052 145 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 LSAMPQ13449 338 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 MELKQ14680 651 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 BCL2A1Q16548 175 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 DGUOKQ16854 277 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 CDONQ4KMG0 1287 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 CCDC58Q4VC31 144 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF766Q5HY98 468 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 THEM4Q5T1C6 240 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ATP1A1-AS1Q5TC04 95 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 LIPKQ5VXJ0 399 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 HBMQ6B0K9 141 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 IGFL2Q6UWQ7 119 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 GALNTL5Q7Z4T8 443 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 YRDCQ86U90 279 aaKnown RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 GPAT4Q86UL3 456 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 OR6V1Q8N148 313 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ZFP62Q8NB50 900 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ZNF485Q8NCK3 441 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NOXO1Q8NFA2 376 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 OR6X1Q8NH79 312 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 SPRYD4Q8WW59 207 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 ASB17Q8WXJ9 295 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 DNAJA3Q96EY1 480 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 SLC25A44Q96H78 314 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 DCUN1D5Q9BTE7 237 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 TTTY12Q9BZ98 90 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 NUAK2Q9H093 628 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 KCNN2Q9H2S1 579 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 WDR76Q9H967 626 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 B3GAT1Q9P2W7 334 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 LAMP5Q9UJQ1 280 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 GSTK1Q9Y2Q3 226 aa8.66□□□□□ -1.02
UBFD1-202ENST00000563366 CNOT1A5YKK6 2376 aaKnown RBP8.66□□□□□ -1.02
UBFD1-202ENST00000563366 FREM3P0C091 2139 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 ARPC4-TTLL3A0A0A6YYG9 625 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 IGLV1-36A0A0B4J1U3 117 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 TRAV17A0A0B4J275 112 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 LOC100506127A0A0U1RQW1 187 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 H7C1C5 153 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 TRAF3IP2O43734 574 aaPredicted RBP8.65□□□□□ -1.02
UBFD1-202ENST00000563366 SLC16A7O60669 478 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 TMCC2O75069 709 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 KHDRBS3O75525 346 aaKnown RBP8.65□□□□□ -1.02
UBFD1-202ENST00000563366 CEACAM4O75871 244 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 GLSO94925 669 aaPredicted RBP8.65□□□□□ -1.02
UBFD1-202ENST00000563366 ACTL6AO96019 429 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 F10P00742 488 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 SERPINA3P01011 423 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 HLA-DQA2P01906 255 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 TFP02787 698 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 HRGP04196 525 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 KRT8P05787 483 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 CD1AP06126 327 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 RFPL3SP0C7P2 107 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 PCSK6P29122 969 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 SHC1P29353 583 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 PYCR1P32322 319 aa8.65□□□□□ -1.02
UBFD1-202ENST00000563366 SOX6P35712 828 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms