RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 C3orf36Q3SXR2 165 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SMARCD3Q6STE5 483 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 KLHL17Q6TDP4 642 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 DPY19L2P2Q6ZN68 376 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 FOXL2NBQ6ZUU3 175 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 HDDC2Q7Z4H3 204 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 MDP1Q86V88 176 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 CCDC36Q8IYA8 594 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SLC22A24Q8N4F4 322 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 GNPDA2Q8TDQ7 276 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 NABP1Q96AH0 204 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 RASD2Q96D21 266 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SAMD8Q96LT4 415 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SLC38A2Q96QD8 506 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SH3GL3Q99963 347 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 CXXC4Q9H2H0 198 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 OR52D1Q9H346 318 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SMURF2Q9HAU4 748 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 STX18Q9P2W9 335 aaKnown RBP7.43□□□□□ -1.22
UBR1-204ENST00000563239 TMCC3Q9ULS5 477 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 SAMHD1Q9Y3Z3 626 aaKnown RBP7.43□□□□□ -1.22
UBR1-204ENST00000563239 IER3IP1Q9Y5U9 82 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 MAGED1Q9Y5V3 778 aaPredicted RBP7.43□□□□□ -1.22
UBR1-204ENST00000563239 U3KQV3 271 aa7.43□□□□□ -1.22
UBR1-204ENST00000563239 NF1P21359 2839 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 TEX13CA0A0J9YWL9 993 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 SLC22A23A1A5C7 686 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 A6NIZ1 184 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 ATP6V1G2-DDX39BF2Z307 99 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 ARHGEF9O43307 516 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 FKBP6O75344 327 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 CCNB2O95067 398 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 PPP1R3DO95685 299 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 CST1P01037 141 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 CD8AP01732 235 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 IGFBP1P08833 259 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 MMP7P09237 267 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 ZNF14P17017 642 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 DNASE1P24855 282 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 CALCRP30988 508 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 HOXC12P31275 282 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 IFNGR2P38484 337 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 CDKN2AP42771 156 aaKnown RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 RAP1BP61224 184 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 RAP1AP62834 184 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 MRPS34P82930 218 aaKnown RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 CBX1P83916 185 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 NAAAQ02083 359 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 HGFACQ04756 655 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 PIGFQ07326 219 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 DBPQ10586 325 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 KEAP1Q14145 624 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 ETFDHQ16134 617 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 MICAQ29983 383 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 DEFB113Q30KQ7 82 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 NRN1LQ496H8 165 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 THEM4Q5T1C6 240 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 FAM205BPQ63HN1 556 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 ZNF620Q6ZNG0 422 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 C20orf204Q6ZNR8 217 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 PTCHD4Q6ZW05 846 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 SPATA24Q86W54 205 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 KRTAP1-3Q8IUG1 177 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 ZNF584Q8IVC4 421 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 LINC00471Q8N535 108 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 OR8D4Q8NGM9 314 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 FANK1Q8TC84 345 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 NSMAFQ92636 917 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 RADILQ96JH8 1075 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 FOXC2Q99958 501 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 PLA2G12AQ9BZM1 189 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 MMADHCQ9H3L0 296 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 EGLN3Q9H6Z9 239 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 REEP1Q9H902 201 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 KRCC1Q9NPI7 259 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 CISD1Q9NZ45 108 aaKnown RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 VSX1Q9NZR4 365 aaPredicted RBP7.42□□□□□ -1.22
UBR1-204ENST00000563239 GRHPRQ9UBQ7 328 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 ITGB1BP2Q9UKP3 347 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 MOKQ9UQ07 419 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 MGAT4BQ9UQ53 548 aa7.42□□□□□ -1.22
UBR1-204ENST00000563239 NAV3Q8IVL0 2385 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 PRSS37A4D1T9 235 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 OVOL3O00110 214 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 BHLHE40O14503 412 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 SOCS2O14508 198 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 ARPC3O15145 178 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 AHCYL1O43865 530 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 STAMBPO95630 424 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 OR8G3PP0DMU2 310 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CD79AP11912 226 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 ZNF35P13682 527 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 APEHP13798 732 aaKnown RBP7.41□□□□□ -1.22
UBR1-204ENST00000563239 PAX1P15863 534 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 CTLA4P16410 223 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 PAX7P23759 505 aa7.41□□□□□ -1.22
UBR1-204ENST00000563239 SDHAP31040 664 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms