RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 GZMKP49863 264 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 RUNX1T1Q06455 604 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 ANKDD1AQ495B1 522 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 IQCCQ4KMZ1 466 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 ARMC4Q5T2S8 1044 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 C6orf52Q5T4I8 152 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 RRM2BQ7LG56 351 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 CYP4Z1Q86W10 505 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 RNF113BQ8IZP6 322 aaKnown RBP14.53□□□□□ -0.08
CLK3-210ENST00000563112 SLC30A7Q8NEW0 376 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 OR1J2Q8NGS2 313 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 FGFBP3Q8TAT2 258 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 FOXN4Q96NZ1 517 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 SEPHS2Q99611 448 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 LRMDAQ9H2I8 198 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 MS4A5Q9H3V2 200 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 CDH20Q9HBT6 801 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 RHCGQ9UBD6 479 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 HIF3AQ9Y2N7 669 aa14.53□□□□□ -0.08
CLK3-210ENST00000563112 IQCMA0A1B0GVH7 501 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 SYNGR3O43761 229 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 GMNNO75496 209 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 SERPINA1P01009 418 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 ADRA2AP08913 450 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 DAOP14920 347 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 PSME3P61289 254 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 PRKCDQ05655 676 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 CD47Q08722 323 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 C10orf128Q5T292 105 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 C8orf82Q6P1X6 216 aaPredicted RBP14.52□□□□□ -0.09
CLK3-210ENST00000563112 CPLX4Q7Z7G2 160 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 HIPK1Q86Z02 1210 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 NRMQ8IXM6 262 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 RBM15BQ8NDT2 890 aaKnown RBP14.52□□□□□ -0.09
CLK3-210ENST00000563112 FNDC8Q8TC99 324 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 ACOT11Q8WXI4 607 aaPredicted RBP14.52□□□□□ -0.09
CLK3-210ENST00000563112 HSH2DQ96JZ2 352 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 RBP7Q96R05 134 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 KCNK17Q96T54 332 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 MRPL37Q9BZE1 423 aaKnown RBP14.52□□□□□ -0.09
CLK3-210ENST00000563112 FAM107BQ9H098 131 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 SIAEQ9HAT2 523 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 SMURF2Q9HAU4 748 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 RPS6KA6Q9UK32 745 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 SNX13Q9Y5W8 968 aa14.52□□□□□ -0.09
CLK3-210ENST00000563112 YLPM1P49750 1951 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 EFCAB9A8MZ26 197 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 J3KTA2 159 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 M0R233 179 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 STAMBPO95630 424 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 APEHP13798 732 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 PRDX6P30041 224 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 GUCA1AP43080 201 aaPredicted RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 SLC9A3P48764 834 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ZNF133P52736 654 aaPredicted RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 SEC24CP53992 1094 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 SELENOVP59797 346 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 CTXN1P60606 82 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 RPL27P61353 136 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 MRPS34P82930 218 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 HSF2Q03933 536 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 TOP3AQ13472 1001 aaPredicted RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 FXNQ16595 210 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 TBC1D28Q2M2D7 210 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 CHRFAM7AQ494W8 412 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 FAM205BPQ63HN1 556 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ZNF730Q6ZMV8 503 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 OAFQ86UD1 273 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ZNF584Q8IVC4 421 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ZCCHC24Q8N2G6 241 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 LRRC18Q8N456 261 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 UBASH3BQ8TF42 649 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 SYT3Q9BQG1 590 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ALG12Q9BV10 488 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 MYLK2Q9H1R3 596 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 CCNB1IP1Q9NPC3 277 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 REV1Q9UBZ9 1251 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ADAM21Q9UKJ8 722 aa14.51□□□□□ -0.09
CLK3-210ENST00000563112 ZNF346Q9UL40 294 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 FAM32AQ9Y421 112 aaKnown RBP14.51□□□□□ -0.09
CLK3-210ENST00000563112 KIAA1324LA8MWY0 1029 aaPredicted RBP14.5□□□□□ -0.09
CLK3-210ENST00000563112 FFAR1O14842 300 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 SLC2A10O95528 541 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 IFNA2P01563 188 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 IGHV4-31P0DP07 118 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 NCK1P16333 377 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 MAKP20794 623 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 SGCAQ16586 387 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 THEM4Q5T1C6 240 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 RGS7BPQ6MZT1 257 aaPredicted RBP14.5□□□□□ -0.09
CLK3-210ENST00000563112 MBOAT2Q6ZWT7 520 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 ZNF786Q8N393 782 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 OR51A7Q8NH64 312 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 NSMAFQ92636 917 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 HDAC2Q92769 488 aaKnown RBP14.5□□□□□ -0.09
CLK3-210ENST00000563112 NDEL1Q9GZM8 345 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 TPK1Q9H3S4 243 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 ANKRD19PQ9H560 264 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 SPAG4Q9NPE6 437 aa14.5□□□□□ -0.09
CLK3-210ENST00000563112 MAN2C1Q9NTJ4 1040 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms