RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 POU4F3Q15319 338 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SYT6Q5T7P8 510 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 TMPRSS12Q86WS5 348 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZSCAN4Q8NAM6 433 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 ST7LQ8TDW4 575 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 VSTM2LQ96N03 204 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 DUSP21Q9H596 190 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZNF639Q9UID6 485 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 TMEM212A6NML5 194 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 FOXS1O43638 330 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 GABRA5P31644 462 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 APLNRP35414 380 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 OPRL1P41146 370 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 DSCR4P56555 118 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 SNRPD2P62316 118 aaKnown RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 RAB11BQ15907 218 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 MPEG1Q2M385 716 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 OLIG3Q7RTU3 272 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SLC16A9Q7RTY1 509 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 TIPARPQ7Z3E1 657 aaKnown RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 ARIH2OSQ8N7S6 290 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SYT14Q8NB59 555 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 CCDC54Q8NEL0 328 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 OR1J2Q8NGS2 313 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 MFSD8Q8NHS3 518 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 CST11Q9H112 138 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 AASSQ9UDR5 926 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 A4GNTQ9UNA3 340 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 CAMK2AQ9UQM7 478 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 CACNG2Q9Y698 323 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 TRAV17A0A0B4J275 112 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 IGKV1-8A0A0C4DH67 115 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SULT1C2O00338 296 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 BCAS1O75363 584 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 TFAP2AP05549 437 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 PRKXP51817 358 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SLC35A2P78381 396 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 GPR50Q13585 617 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 TP53I3Q53FA7 332 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 OLFML2AQ68BL7 652 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZNF627Q7L945 461 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SLC25A45Q8N413 288 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 DEFB124Q8NES8 71 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 DDA1Q9BW61 102 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZNF436Q9C0F3 470 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 CRLF2Q9HC73 371 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 TAS2R8Q9NYW2 309 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 MYOTQ9UBF9 498 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 PIGBOS1A0A0B4J2F0 54 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 FAM183AA6NL82 134 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 LRP3O75074 770 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SMIM10L1P0DMW3 83 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 DDOSTP39656 456 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 CLDN17P56750 224 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 COL9A2Q14055 689 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 KIRREL2Q6UWL6 708 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SAMD12Q8N8I0 201 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 OR4Q3Q8NH05 313 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 SMIM10Q96HG1 83 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 ZNF845Q96IR2 970 aaPredicted RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 FAM173AQ9BQD7 235 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 CDCA4Q9BXL8 241 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 DPAGT1Q9H3H5 408 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 A3GALT2U3KPV4 340 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 NLRC5Q86WI3 1866 aa6.88□□□□□ -1.31
TCF4-216ENST00000562680 NYNRINQ9P2P1 1898 aaKnown RBP6.88□□□□□ -1.31
TCF4-216ENST00000562680 FITM1A5D6W6 292 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 M0R082 166 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 IFNA17P01571 189 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 SCG5P05408 212 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 ABOP16442 354 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 CCNOP22674 350 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 PAX6P26367 422 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 BMI1P35226 326 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 ALDH3B2P48448 385 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 LSSP48449 732 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 BDH1Q02338 343 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 SYT14P1Q58G82 188 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 MAML2Q8IZL2 1156 aaPredicted RBP6.87□□□□□ -1.31
TCF4-216ENST00000562680 SIRT6Q8N6T7 355 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 OR13F1Q8NGS4 319 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 ADAMTS14Q8WXS8 1223 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 FBXW5Q969U6 566 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 FAM46BQ96A09 425 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 C4orf36Q96KX1 117 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 MBOAT4Q96T53 435 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 MENTQ9BUN1 341 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 TTTY10Q9BZA0 68 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 GHITMQ9H3K2 345 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 ABRACLQ9P1F3 81 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 ZNF281Q9Y2X9 895 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 TVP23AA6NH52 213 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 ARPC3O15145 178 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 C21orf33P30042 268 aaPredicted RBP6.87□□□□□ -1.31
TCF4-216ENST00000562680 BIDP55957 195 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 SLC36A2Q495M3 483 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 VASNQ6EMK4 673 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 LIX1LQ8IVB5 337 aa6.87□□□□□ -1.31
TCF4-216ENST00000562680 SYS1Q8N2H4 156 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms