RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 OSMP13725 252 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 ANXA8P13928 327 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 GSTM3P21266 225 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 NOS3P29474 1203 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 CDAP32320 146 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLK3-208ENST00000562626 CD47Q08722 323 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 RCN1Q15293 331 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 TAF11Q15544 211 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 STK11Q15831 433 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 C10orf128Q5T292 105 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 ALKBH2Q6NS38 261 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 LYPD4Q6UWN0 246 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 WFDC8Q8IUA0 241 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 SKA3Q8IX90 412 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 LNX2Q8N448 690 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 CYB561A3Q8NBI2 242 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 SDR9C7Q8NEX9 313 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 NABP1Q96AH0 204 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 MED18Q9BUE0 208 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 ALG12Q9BV10 488 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 HCAR1Q9BXC0 346 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 C1QTNF6Q9BXI9 259 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 SYT4Q9H2B2 425 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 SLC17A5Q9NRA2 495 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 TMEM38BQ9NVV0 291 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 VSX1Q9NZR4 365 aaPredicted RBP8.56□□□□□ -1.04
CLK3-208ENST00000562626 GRHPRQ9UBQ7 328 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 SLC25A15Q9Y619 301 aa8.56□□□□□ -1.04
CLK3-208ENST00000562626 PDZD2O15018 2839 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 OR6C65A6NJZ3 312 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 FAM171A2A8MVW0 826 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 ZNF99A8MXY4 864 aaPredicted RBP8.55□□□□□ -1.04
CLK3-208ENST00000562626 CENPBD1B2RD01 187 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 H3BN98 237 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 MPZL1O95297 269 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 BAG2O95816 211 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 PLAUP00749 431 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 CLUP10909 449 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 EPXP11678 715 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 APEHP13798 732 aaKnown RBP8.55□□□□□ -1.04
CLK3-208ENST00000562626 COX6B1P14854 86 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 ANPEPP15144 967 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 CRYGSP22914 178 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 POU1F1P28069 291 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 CDK5Q00535 292 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 SPOCK1Q08629 439 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 COX10Q12887 443 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 CRMP1Q14194 572 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 GINS1Q14691 196 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 PGGHGQ32M88 737 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 LPCAT4Q643R3 524 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 GPR139Q6DWJ6 353 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 LEG1Q6P5S2 330 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 UGT2A3Q6UWM9 527 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 ZNF813Q6ZN06 617 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 ZNF627Q7L945 461 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 HIPK1Q86Z02 1210 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 SVOPLQ8N434 492 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 CBR4Q8N4T8 237 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 SLC37A3Q8NCC5 494 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 NPEPL1Q8NDH3 523 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 C1orf162Q8NEQ5 155 aaPredicted RBP8.55□□□□□ -1.04
CLK3-208ENST00000562626 STEAP2Q8NFT2 490 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 OR52E2Q8NGJ4 325 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 LRRC46Q96FV0 321 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 BOD1Q96IK1 185 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 ZNF75AQ96N20 296 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 FOXB1Q99853 325 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 SH3GL3Q99963 347 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 NUAK2Q9H093 628 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 MED20Q9H944 212 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
CLK3-208ENST00000562626 KRT84Q9NSB2 600 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 TACC2O95359 2948 aa8.55□□□□□ -1.04
CLK3-208ENST00000562626 IGLV1-36A0A0B4J1U3 117 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 FAM221AA4D161 298 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 A6NIZ1 184 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 FAM183AA6NL82 134 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 E9PQ18 207 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 DLGAP1O14490 977 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 HLA-HP01893 362 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 ALPLP05186 524 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 GYPBP06028 91 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 GAAP10253 952 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 PEX2P28328 305 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 PYCR1P32322 319 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 GIPRP48546 466 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 RPS6KA3P51812 740 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 CRISP1P54107 249 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 RAP1BP61224 184 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 RAP1AP62834 184 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 DAG1Q14118 895 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 PPA1Q15181 289 aa8.54□□□□□ -1.04
CLK3-208ENST00000562626 PTGES3Q15185 160 aaKnown RBP8.54□□□□□ -1.04
CLK3-208ENST00000562626 MEP1BQ16820 701 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms