RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HCRTR1O43613 425 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 AMY2AP04746 511 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 ALOX5APP20292 161 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 MC2RQ01718 297 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 ERV3-1Q14264 604 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 PLPP7Q8NBV4 271 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 MARC2Q969Z3 335 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 SYT4Q9H2B2 425 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 PCOLCE2Q9UKZ9 415 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM14AQ9Y6G1 99 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 A0A0D9SG52 128 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ITGB2P05107 769 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 MST1P26927 711 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 KIR3DL2P43630 455 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 TAS2R19P59542 299 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 RPL18Q07020 188 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 TAF13Q15543 124 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 MESTQ5EB52 335 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 BEX5Q5H9J7 111 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM205Q6UW68 189 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM17Q86X19 198 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 BOLLQ8N9W6 283 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 PHOSPHO1Q8TCT1 267 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ASB13Q8WXK3 278 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 MCHR2Q969V1 340 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 C4orf45Q96LM5 186 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 FOXN4Q96NZ1 517 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ELF4Q99607 663 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 LPAR4Q99677 370 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 MMP25Q9NPA2 562 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 RASL12Q9NYN1 266 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 COMMD9Q9P000 198 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ERVK-19Q9WJR5 959 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 MPDZO75970 2070 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 A0A0A6YYC8 382 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 A0A0J9YY10 115 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 OR5H14A6NHG9 310 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 I3L1I5 382 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 CTSBP07858 339 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 CT45A8P0DMV1 189 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 CT45A9P0DMV2 189 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 PNMTP11086 282 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 APEHP13798 732 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 RAB3AP20336 220 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 FCARP24071 287 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 PPP1CAP62136 330 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 EGR3Q06889 387 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 SCGB2B2Q4G0G5 96 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 CT45A2Q5DJT8 189 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 LY6G6FQ5SQ64 297 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 MANEAQ5SRI9 462 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 LIN54Q6MZP7 749 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 LRRC75AQ8NAA5 344 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ATOH1Q92858 354 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 DGAT2Q96PD7 388 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 TSPAN32Q96QS1 320 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 AMELYQ99218 206 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 NPAS1Q99742 590 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 PLA2G2FQ9BZM2 168 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 TINAGL1Q9GZM7 467 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ALX4Q9H161 411 aaPredicted RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 FBXO4Q9UKT5 387 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 FARSAQ9Y285 508 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 ALPK2Q86TB3 2170 aa12.65□□□□□ -0.38
VPS9D1-202ENST00000561976 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.39
VPS9D1-202ENST00000561976 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC17A2O00624 439 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 GMFGO60234 142 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 CSN2P05814 226 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 GUSBP08236 651 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 FGL1Q08830 312 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 CLVS2Q5SYC1 327 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC35D2Q76EJ3 337 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 MCATQ8IVS2 390 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 BPIFCQ8NFQ6 507 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 OR1J2Q8NGS2 313 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 OR10Z1Q8NGY1 313 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 GPX8Q8TED1 209 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ELOVL3Q9HB03 270 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 GPN3Q9UHW5 284 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC22A13Q9Y226 551 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 A6NCN8 305 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 PBX2P40425 430 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 MEP1BQ16820 701 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 OOSP2Q86WS3 158 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF440Q8IYI8 595 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 GALNT16Q8N428 558 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms