RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SYT3Q9BQG1 590 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 BEX2Q9BXY8 128 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 TPK1Q9H3S4 243 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 RNF121Q9H920 327 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 DYNLRB1Q9NP97 96 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 MYEF2Q9P2K5 600 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 REV1Q9UBZ9 1251 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 CDC42EP3Q9UKI2 254 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 AP3M1Q9Y2T2 418 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 SNX13Q9Y5W8 968 aa8.85□□□□□ -0.99
CLK3-205ENST00000561673 CHD3Q12873 2000 aaKnown RBP8.85□□□□□ -0.99
CLK3-205ENST00000561673 LOC100289279A0A1B0GTE1 492 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 LRP5LA4QPB2 252 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 CENPBD1B2RD01 187 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 LYNX1G3V0Z9 82 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 J3KTA2 159 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 FFAR1O14842 300 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 LMX1BO60663 402 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 SLC2A10O95528 541 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 IFNA2P01563 188 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 FAM157CP0CG43 387 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 LYNX1P0DP58 116 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 ZNF23P17027 643 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 TCN1P20061 433 aaPredicted RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 MAKP20794 623 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 CDAP32320 146 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 ALDH3B1P43353 468 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 ZNF84P51523 738 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 ZNF133P52736 654 aaPredicted RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 SEC24CP53992 1094 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 RPS23P62266 143 aaKnown RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 RIN1Q13671 783 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 SLC36A2Q495M3 483 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 NRN1LQ496H8 165 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 C10orf128Q5T292 105 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 C8orf82Q6P1X6 216 aaPredicted RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 TMEM53Q6P2H8 277 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 PODNL1Q6PEZ8 512 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 HDDC2Q7Z4H3 204 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 DPPA2Q7Z7J5 298 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 MEX3DQ86XN8 651 aaKnown RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 LRRC18Q8N456 261 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 NOXO1Q8NFA2 376 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 LZICQ8WZA0 190 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 HDAC2Q92769 488 aaKnown RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 BPIFA2Q96DR5 249 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 PRRC1Q96M27 445 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 HOPXQ9BPY8 73 aaPredicted RBP8.84□□□□□ -0.99
CLK3-205ENST00000561673 SOX7Q9BT81 388 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 TXNIPQ9H3M7 391 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 RHCGQ9UBD6 479 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 SLC7A8Q9UHI5 535 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 DUSP13Q9UII6 198 aa8.84□□□□□ -0.99
CLK3-205ENST00000561673 IGKV1D-43A0A0B4J1Z2 117 aa8.83□□□□□ -1
CLK3-205ENST00000561673 NPIPB13A6NJU9 1138 aa8.83□□□□□ -1
CLK3-205ENST00000561673 NPIPB4C9JG80 1138 aa8.83□□□□□ -1
CLK3-205ENST00000561673 M0R233 179 aa8.83□□□□□ -1
CLK3-205ENST00000561673 CXCR6O00574 342 aa8.83□□□□□ -1
CLK3-205ENST00000561673 NME4O00746 187 aa8.83□□□□□ -1
CLK3-205ENST00000561673 CCDC22O60826 627 aa8.83□□□□□ -1
CLK3-205ENST00000561673 LILRA1O75019 489 aa8.83□□□□□ -1
CLK3-205ENST00000561673 ZNF682O95780 498 aa8.83□□□□□ -1
CLK3-205ENST00000561673 IFNW1P05000 195 aa8.83□□□□□ -1
CLK3-205ENST00000561673 MMP7P09237 267 aaPredicted RBP8.83□□□□□ -1
CLK3-205ENST00000561673 TACSTD2P09758 323 aa8.83□□□□□ -1
CLK3-205ENST00000561673 FAM157BP0CG42 384 aa8.83□□□□□ -1
CLK3-205ENST00000561673 IFI30P13284 250 aa8.83□□□□□ -1
CLK3-205ENST00000561673 IGFBP5P24593 272 aa8.83□□□□□ -1
CLK3-205ENST00000561673 IL2RGP31785 369 aa8.83□□□□□ -1
CLK3-205ENST00000561673 IFNA8P32881 189 aa8.83□□□□□ -1
CLK3-205ENST00000561673 LSP1P33241 339 aa8.83□□□□□ -1
CLK3-205ENST00000561673 MMP16P51512 607 aa8.83□□□□□ -1
CLK3-205ENST00000561673 SLC7A2P52569 658 aa8.83□□□□□ -1
CLK3-205ENST00000561673 FHL1Q13642 323 aa8.83□□□□□ -1
CLK3-205ENST00000561673 MAD2L1BPQ15013 274 aaPredicted RBP8.83□□□□□ -1
CLK3-205ENST00000561673 ALG10Q5BKT4 473 aa8.83□□□□□ -1
CLK3-205ENST00000561673 ELFN2Q5R3F8 820 aa8.83□□□□□ -1
CLK3-205ENST00000561673 FAM166AQ6J272 317 aa8.83□□□□□ -1
CLK3-205ENST00000561673 ARPINQ7Z6K5 226 aa8.83□□□□□ -1
CLK3-205ENST00000561673 TREML1Q86YW5 311 aa8.83□□□□□ -1
CLK3-205ENST00000561673 RBM15BQ8NDT2 890 aaKnown RBP8.83□□□□□ -1
CLK3-205ENST00000561673 CPEB3Q8NE35 698 aaKnown RBP8.83□□□□□ -1
CLK3-205ENST00000561673 NSMAFQ92636 917 aa8.83□□□□□ -1
CLK3-205ENST00000561673 NABP1Q96AH0 204 aa8.83□□□□□ -1
CLK3-205ENST00000561673 NMD3Q96D46 503 aaKnown RBP8.83□□□□□ -1
CLK3-205ENST00000561673 FNDC11Q9BVV2 318 aa8.83□□□□□ -1
CLK3-205ENST00000561673 SHARPINQ9H0F6 387 aa8.83□□□□□ -1
CLK3-205ENST00000561673 MS4A5Q9H3V2 200 aa8.83□□□□□ -1
CLK3-205ENST00000561673 EFCAB1Q9HAE3 211 aa8.83□□□□□ -1
CLK3-205ENST00000561673 SIAEQ9HAT2 523 aa8.83□□□□□ -1
CLK3-205ENST00000561673 MED4Q9NPJ6 270 aa8.83□□□□□ -1
CLK3-205ENST00000561673 MAN2C1Q9NTJ4 1040 aa8.83□□□□□ -1
CLK3-205ENST00000561673 KCNS2Q9ULS6 477 aa8.83□□□□□ -1
CLK3-205ENST00000561673 HIF3AQ9Y2N7 669 aa8.83□□□□□ -1
CLK3-205ENST00000561673 UGT2A1Q9Y4X1 527 aa8.83□□□□□ -1
CLK3-205ENST00000561673 YLPM1P49750 1951 aaKnown RBP8.82□□□□□ -1
CLK3-205ENST00000561673 TRAV27A0A087WT01 109 aa8.82□□□□□ -1
CLK3-205ENST00000561673 IQCMA0A1B0GVH7 501 aa8.82□□□□□ -1
CLK3-205ENST00000561673 SLC22A23A1A5C7 686 aa8.82□□□□□ -1
CLK3-205ENST00000561673 HTR3EA5X5Y0 456 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms