RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 RNF121Q9H920 327 aa9.95□□□□□ -0.82
USP3-220ENST00000561381 HIF1ANQ9NWT6 349 aa9.95□□□□□ -0.82
USP3-220ENST00000561381 TAAR3PQ9P1P4 343 aa9.95□□□□□ -0.82
USP3-220ENST00000561381 FBXL3Q9UKT7 428 aa9.95□□□□□ -0.82
USP3-220ENST00000561381 FBP2O00757 339 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 CDC14BO60729 498 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 VENTXO95231 258 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 FARS2O95363 451 aaKnown RBP9.94□□□□□ -0.82
USP3-220ENST00000561381 IGHG1P01857 330 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 GAAP10253 952 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 LSP1P33241 339 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 UGT2B15P54855 530 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 CLRN1P58418 232 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 LMO4P61968 165 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 CCL8P80075 99 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 RPL18Q07020 188 aaKnown RBP9.94□□□□□ -0.82
USP3-220ENST00000561381 HIST3H3Q16695 136 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 NKPD1Q17RQ9 610 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 VMACQ2NL98 169 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 RABL3Q5HYI8 236 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 SLC16A14Q7RTX9 510 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 NANOGNBQ7Z5D8 188 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 GLCCI1Q86VQ1 547 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 NKAIN4Q8IVV8 208 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 LRRC18Q8N456 261 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
USP3-220ENST00000561381 SYT14Q8NB59 555 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 ICA1LQ8NDH6 482 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 SLC26A7Q8TE54 656 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 TMEM255BQ8WV15 326 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 TMEM186Q96B77 213 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 MPP4Q96JB8 637 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 MRPL13Q9BYD1 178 aaKnown RBP9.94□□□□□ -0.82
USP3-220ENST00000561381 SLC19A3Q9BZV2 496 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 CDH20Q9HBT6 801 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 NPHS2Q9NP85 383 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 HINT3Q9NQE9 182 aaKnown RBP9.94□□□□□ -0.82
USP3-220ENST00000561381 C20orf141Q9NUB4 165 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 INTS9Q9NV88 658 aaKnown RBP9.94□□□□□ -0.82
USP3-220ENST00000561381 TRIM33Q9UPN9 1127 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 SH3GLB1Q9Y371 365 aa9.94□□□□□ -0.82
USP3-220ENST00000561381 IGLV3-9A0A075B6K5 115 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 IGKV1D-43A0A0B4J1Z2 117 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 C17orf100A8MU93 164 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 TRMUO75648 421 aaKnown RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 RGS9O75916 674 aaPredicted RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 OR7A10O76100 309 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 SLC2A10O95528 541 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 LCKP06239 509 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 MSMBP08118 114 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 MMP7P09237 267 aaPredicted RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 ZNF250P15622 560 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 FUT1P19526 365 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 CDAP32320 146 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 AQP2P41181 271 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 TMEM33P57088 247 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 KLF3P57682 345 aaPredicted RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 MRPS11P82912 194 aaKnown RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 GLO1Q04760 184 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 TBC1D28Q2M2D7 210 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 TMEM255AQ5JRV8 349 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 AVPI1Q5T686 147 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 REP15Q6BDI9 236 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 NANOGP8Q6NSW7 305 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 TMEM53Q6P2H8 277 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 UGT2A3Q6UWM9 527 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 CCDC80Q76M96 950 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 SLC30A8Q8IWU4 369 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 RBM15BQ8NDT2 890 aaKnown RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 CPEB3Q8NE35 698 aaKnown RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 NOXO1Q8NFA2 376 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 MOSPD2Q8NHP6 518 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 SYNPRQ8TBG9 265 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 STON2Q8WXE9 905 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 ASB10Q8WXI3 467 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 MAGEB18Q96M61 343 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 LRRC37BQ96QE4 947 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 SEPHS2Q99611 448 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 NANOGQ9H9S0 305 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 ZNF346Q9UL40 294 aaKnown RBP9.93□□□□□ -0.82
USP3-220ENST00000561381 CACNG2Q9Y698 323 aa9.93□□□□□ -0.82
USP3-220ENST00000561381 A0A0G2JND7 137 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 A0A1W2PRG6 482 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 SLC22A23A1A5C7 686 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 MCIDASD6RGH6 385 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 FXYD1O00168 92 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 EDF1O60869 148 aaKnown RBP9.92□□□□□ -0.82
USP3-220ENST00000561381 ENTPD5O75356 428 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 SNAP29O95721 258 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 TFP02787 698 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 MT-ND1P03886 318 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 VSIG8P0DPA2 414 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 ACADSP16219 412 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 UCP2P55851 309 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 TAS2R41P59536 307 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 MVKQ03426 396 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 FMODQ06828 376 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 PIN1Q13526 163 aaPredicted RBP9.92□□□□□ -0.82
USP3-220ENST00000561381 SLC36A2Q495M3 483 aa9.92□□□□□ -0.82
USP3-220ENST00000561381 ARMC4Q5T2S8 1044 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms