RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CTLA4P16410 223 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 HOXD11P31277 338 aaPredicted RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 NAA10P41227 235 aaPredicted RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 WNT4P56705 351 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ACTA2P62736 377 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ACTG2P63267 376 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 HIST3H3Q16695 136 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 TIGD6Q17RP2 521 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ARMCX4Q5H9R4 360 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 LINC01590Q5TEZ4 76 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 CARD17Q5XLA6 110 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 PLEKHG7Q6ZR37 379 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 P4HA3Q7Z4N8 544 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 KCTD20Q7Z5Y7 419 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 SIAH3Q8IW03 269 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 GLB1L2Q8IW92 636 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 GPR137CQ8N3F9 429 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ZIC4Q8N9L1 334 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 TEX19Q8NA77 164 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 NOXO1Q8NFA2 376 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 OR10H5Q8NGA6 315 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 OR13F1Q8NGS4 319 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 OR52N1Q8NH53 320 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 SNX33Q8WV41 574 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 TMIGD2Q96BF3 282 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 OR2M2Q96R28 347 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 MGLLQ99685 303 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 CDADC1Q9BWV3 514 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 PRDM14Q9GZV8 571 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 WDR76Q9H967 626 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 MARCH7Q9H992 704 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ISYNA1Q9NPH2 558 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ZNF71Q9NQZ8 489 aaPredicted RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 GLRX2Q9NS18 164 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 SPRR3Q9UBC9 169 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 CLEC2DQ9UHP7 191 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 COA3Q9Y2R0 106 aaPredicted RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 NOSIPQ9Y314 301 aaKnown RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 FLVCR1Q9Y5Y0 555 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 CFAP47Q6ZTR5 3102 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 A0A1B0GTH9 108 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 H3BSA7 217 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ZNF593O00488 134 aaPredicted RBP9.15□□□□□ -0.94
USP3-219ENST00000561326 KRT33AO76009 404 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 PTHP01270 115 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 MT-ND5P03915 603 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 HRGP04196 525 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 LCKP06239 509 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 YES1P07947 543 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 FAM87AP0C7U9 286 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 KLK2P20151 261 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 LAP3P28838 519 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ENTPD1P49961 510 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ZNF84P51523 738 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 SLC25A47Q6Q0C1 308 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 C20orf196Q8IYI0 205 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ZNF454Q8N9F8 522 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ZNF420Q8TAQ5 688 aaPredicted RBP9.15□□□□□ -0.94
USP3-219ENST00000561326 FNDC9Q8TBE3 224 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 HAVCR2Q8TDQ0 301 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 RNF128Q8TEB7 428 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ZNRF4Q8WWF5 429 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 NSMAFQ92636 917 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 TMEM54Q969K7 222 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 MCHR2Q969V1 340 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 TMEM45BQ96B21 275 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ZNF385AQ96PM9 386 aaKnown RBP9.15□□□□□ -0.94
USP3-219ENST00000561326 TBX5Q99593 518 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 ALG8Q9BVK2 526 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 SEC61A2Q9H9S3 476 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 LAMP5Q9UJQ1 280 aa9.15□□□□□ -0.94
USP3-219ENST00000561326 NCOR2Q9Y618 2525 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 A0A1W2PPL8 197 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 A0A1W2PQL4 384 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 MED19A0JLT2 244 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 TVP23AA6NH52 213 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 J3QLW9 94 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ZNF701M0R085 212 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 CCRL2O00421 344 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 DHHO43323 396 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 SELENOFO60613 162 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ZNF432O94892 652 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 SCG5P05408 212 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 HOXD4P09016 255 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 GABRA1P14867 456 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 CD36P16671 472 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ZNF19P17023 458 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 PTGS2P35354 604 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 PTGER4P35408 488 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 GTF2A1P52655 376 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 ZNF133P52736 654 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 TMBIM6P55061 237 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 GP2P55259 537 aaKnown RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 ADAM8P78325 824 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 FMODQ06828 376 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ACSM1Q08AH1 577 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms