RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PLGP00747 810 aaPredicted RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 ADORA3P0DMS8 318 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 OSMP13725 252 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 HOXB4P17483 251 aaPredicted RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 GSTM3P21266 225 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ENPP1P22413 925 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 EDNRAP25101 427 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 FKBP2P26885 142 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 APOBEC1P41238 236 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 DIO1P49895 249 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 MAP2K6P52564 334 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CARD18P57730 90 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 VBP1P61758 197 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CDK6Q00534 326 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 MLLT11Q13015 90 aaPredicted RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 SCARB2Q14108 478 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 P2RY6Q15077 328 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 GPR68Q15743 365 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ACKR1Q16570 336 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 TMEM176BQ3YBM2 270 aaPredicted RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 SFRP5Q5T4F7 317 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 MRPL2Q5T653 305 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 C1QTNF12Q5T7M4 302 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ZNF770Q6IQ21 691 aaPredicted RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 REEP3Q6NUK4 255 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 METAP1DQ6UB28 335 aaPredicted RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 TMPPEQ6ZT21 453 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 SSX8Q7RTT4 187 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 TUSC5Q8IXB3 177 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CADM3Q8N126 398 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 STX19Q8N4C7 294 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CLDN22Q8N7P3 220 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ZNF611Q8N823 705 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ZNF614Q8N883 585 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 STEAP2Q8NFT2 490 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 OR8J1Q8NGP2 316 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ROBO4Q8WZ75 1007 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 GGHQ92820 318 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 RAB8BQ92930 207 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 PIGTQ969N2 578 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 SLC35B4Q969S0 331 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ZG16BQ96DA0 208 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ARL5BQ96KC2 179 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 SNX18Q96RF0 628 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 FEVQ99581 238 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 MND1Q9BWT6 205 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CDADC1Q9BWV3 514 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 JAM3Q9BX67 310 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 PRRG3Q9BZD7 231 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 POLR2J2Q9GZM3 115 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 ACTR6Q9GZN1 396 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 QRSL1Q9H0R6 528 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 POLR2J3Q9H1A7 115 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 EVA1AQ9H8M9 152 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 BCL2L10Q9HD36 194 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 FANCFQ9NPI8 374 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 TIGARQ9NQ88 270 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CLN6Q9NWW5 311 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 IMPAD1Q9NX62 359 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 HDGFL3Q9Y3E1 203 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 RPL36Q9Y3U8 105 aaKnown RBP6.08□□□□□ -1.44
SPG11-224ENST00000561268 CHST2Q9Y4C5 530 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 U3KQV3 271 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 TANC2Q9HCD6 1990 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 hCG_2014768A0A024R1R8 64 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 A0A1W2PRQ8 180 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TMEM129A0AVI4 362 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CDHR4A6H8M9 788 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TMEM247A6NEH6 219 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 BOLA2-SMG1P6H3BVE0 249 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 OVOL3O00110 214 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 GTPBP1O00178 669 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 HS3ST1O14792 307 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CASKO14936 926 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ZNF208O43345 1280 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TPD52L2O43399 206 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 MITFO75030 526 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 NPIPB7O75200 414 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 TMEM127O75204 238 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 GADD45GO95257 159 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 NUDT14O95848 222 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 FADS2O95864 444 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 IL1AP01583 271 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 OPN1LWP04000 364 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 YES1P07947 543 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 DANCRP0C864 163 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 PSMA1P25786 263 aaKnown RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 FMO3P31513 532 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 LIPAP38571 399 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 RNF144AP50876 292 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 CCR4P51679 360 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CRISP1P54107 249 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CASP9P55211 416 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 DSTNP60981 165 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CSNK2A1P68400 391 aaPredicted RBP6.07□□□□□ -1.44
SPG11-224ENST00000561268 IFITM3Q01628 133 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 CHRNEQ04844 493 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ACSM1Q08AH1 577 aa6.07□□□□□ -1.44
SPG11-224ENST00000561268 ST3GAL4Q11206 333 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms