RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SYPL1Q16563 259 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 LRRC36Q1X8D7 754 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 GSG1Q2KHT4 349 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 PGS1Q32NB8 556 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 GPAT3Q53EU6 434 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 RABL3Q5HYI8 236 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 C1orf140Q5VVS0 124 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 CYP2R1Q6VVX0 501 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
TPM1-225ENST00000560679 RHOUQ7L0Q8 258 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ANKRD46Q86W74 232 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ZNF584Q8IVC4 421 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 WDFY1Q8IWB7 410 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ANKFN1Q8N957 763 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ICA1LQ8NDH6 482 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 OR4A15Q8NGL6 344 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 SLCO4A1Q96BD0 722 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 OR2M2Q96R28 347 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 CGREF1Q99674 301 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 KCTD14Q9BQ13 255 aaPredicted RBP8.42□□□□□ -1.06
TPM1-225ENST00000560679 TAPBPLQ9BX59 468 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 DPY30Q9C005 99 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 VCXQ9H320 206 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ARMC1Q9NVT9 282 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 RLIMQ9NVW2 624 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 DUSP13Q9UII6 198 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 DSPPQ9NZW4 1301 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 TANC2Q9HCD6 1990 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 DHRS12A0PJE2 317 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 MAGEA13PA6NCF6 341 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 CLDN25C9JDP6 229 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 CLDN34H7C241 214 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 RNASET2O00584 256 aaKnown RBP8.41□□□□□ -1.06
TPM1-225ENST00000560679 TRAF3IP2O43734 574 aaPredicted RBP8.41□□□□□ -1.06
TPM1-225ENST00000560679 AGR2O95994 175 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 IL6P05231 212 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 TFPTP0C1Z6 253 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 GKN3PP0CG01 181 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 PRG2P13727 222 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 UQCRC2P22695 453 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 CRYBB2P43320 205 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 RPS23P62266 143 aaKnown RBP8.41□□□□□ -1.06
TPM1-225ENST00000560679 HPCAP84074 193 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 SLC9A3R2Q15599 337 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 NKPD1Q17RQ9 610 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 ARMCX4Q5H9R4 360 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 NANOGP8Q6NSW7 305 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 DLEU7Q6UYE1 221 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 MSANTD1Q6ZTZ1 278 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 CCDC36Q8IYA8 594 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 GPR137CQ8N3F9 429 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 OR8J3Q8NGG0 315 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 NEURL3Q96EH8 262 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 PRPF18Q99633 342 aaKnown RBP8.41□□□□□ -1.06
TPM1-225ENST00000560679 MMP27Q9H306 513 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 Q9H521 79 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 NANOGQ9H9S0 305 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 HINT3Q9NQE9 182 aaKnown RBP8.41□□□□□ -1.06
TPM1-225ENST00000560679 MMP26Q9NRE1 261 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 PLEK2Q9NYT0 353 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 TAAR3PQ9P1P4 343 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 MAGEL2Q9UJ55 1249 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 NUP50Q9UKX7 468 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 ZNF346Q9UL40 294 aaKnown RBP8.41□□□□□ -1.06
TPM1-225ENST00000560679 AP3M1Q9Y2T2 418 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 MMP24Q9Y5R2 645 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 NOX1Q9Y5S8 564 aa8.41□□□□□ -1.06
TPM1-225ENST00000560679 IGLV3-9A0A075B6K5 115 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 IGHV1-69-2A0A0G2JMI3 117 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 CDHR4A6H8M9 788 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 H0YJX3 145 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 M0R3G1 203 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 FCGR1AP12314 374 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 B4GALT1P15291 398 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 ZNF43P17038 809 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 GIPRP48546 466 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 CLDN8P56748 225 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 ERVS71-1P61550 626 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 EGR4Q05215 589 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 MED21Q13503 144 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 MAPK11Q15759 364 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 SPANXN4Q5MJ08 99 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 ZNF836Q6ZNA1 936 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 USP51Q70EK9 711 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 ZNF627Q7L945 461 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 C1QL4Q86Z23 238 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 ADGRG5Q8IZF4 528 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 CADM2Q8N3J6 435 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 PAQR4Q8N4S7 273 aaPredicted RBP8.4□□□□□ -1.06
TPM1-225ENST00000560679 PIK3C3Q8NEB9 887 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 MFSD8Q8NHS3 518 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 CANT1Q8WVQ1 401 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 LRTOMTQ8WZ04 291 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 GTF2H4Q92759 462 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 POP5Q969H6 163 aaKnown RBP8.4□□□□□ -1.06
TPM1-225ENST00000560679 SLC25A28Q96A46 364 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 TMIGD2Q96BF3 282 aa8.4□□□□□ -1.06
TPM1-225ENST00000560679 KTI12Q96EK9 354 aaPredicted RBP8.4□□□□□ -1.06
TPM1-225ENST00000560679 TRNT1Q96Q11 434 aaKnown RBP8.4□□□□□ -1.06
TPM1-225ENST00000560679 CITED1Q99966 193 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms