RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SH3GL3Q99963 347 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 RMND5AQ9H871 391 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 BEX1Q9HBH7 125 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 MMP26Q9NRE1 261 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 SDR39U1Q9NRG7 319 aaPredicted RBP15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 CHST2Q9Y4C5 530 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 MMP24Q9Y5R2 645 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 WNK1Q9H4A3 2382 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 A0A1B0GWA3 101 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 TIMM23O14925 209 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 OR6A2O95222 327 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 SNAP29O95721 258 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 GPANK1O95872 356 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 IGHV3-13P01766 116 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 SBK2P0C263 348 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 NCALDP61601 193 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 ZNF362Q5T0B9 420 aaPredicted RBP15.08■□□□□ 0
TSPAN3-208ENST00000560514 BRICD5Q6PL45 260 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 PXKQ7Z7A4 578 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 SPICQ8N5J4 248 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 OR6S1Q8NH40 331 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 SLC41A3Q96GZ6 507 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 ITCHQ96J02 903 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 TCF7L2Q9NQB0 619 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 GLTPQ9NZD2 209 aa15.08■□□□□ 0
TSPAN3-208ENST00000560514 ERLIN1O75477 346 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 IGHV1-46P01743 117 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 ZNF12P17014 697 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 CCNOP22674 350 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 APLNRP35414 380 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 MVDP53602 400 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 BIDP55957 195 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 ZNF718Q3SXZ3 478 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 NXNQ6DKJ4 435 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 ULK3Q6PHR2 472 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 UNQ6126/PRO20091Q6UXV3 157 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 SLC16A14Q7RTX9 510 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 LSMEM1Q8N8F7 131 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 RBM15BQ8NDT2 890 aaKnown RBP15.07■□□□□ 0
TSPAN3-208ENST00000560514 OR52E2Q8NGJ4 325 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 OR4F5Q8NH21 305 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 TLCD1Q96CP7 247 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 SLC47A1Q96FL8 570 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 DCLRE1CQ96SD1 692 aaKnown RBP15.07■□□□□ 0
TSPAN3-208ENST00000560514 DIRC2Q96SL1 478 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 TPT1P8Q9HAU6 139 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 TMEM38BQ9NVV0 291 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 MRPL39Q9NYK5 338 aaKnown RBP15.07■□□□□ 0
TSPAN3-208ENST00000560514 PDP1Q9P0J1 537 aaPredicted RBP15.07■□□□□ 0
TSPAN3-208ENST00000560514 INSIG2Q9Y5U4 225 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 NPTNQ9Y639 398 aa15.07■□□□□ 0
TSPAN3-208ENST00000560514 TANC2Q9HCD6 1990 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 IGKV1D-42A0A075B6H8 117 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 C11orf98E9PRG8 122 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 UBDO15205 165 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 UBOX5O94941 541 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 ADORA3P0DMS8 318 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 KITP10721 976 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 LIPAP38571 399 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 MAGOHP61326 146 aaKnown RBP15.06■□□□□ 0
TSPAN3-208ENST00000560514 SRSF4Q08170 494 aaKnown RBP15.06■□□□□ 0
TSPAN3-208ENST00000560514 FAM91A1Q658Y4 838 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 KIR3DL3Q8N743 410 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 WFDC12Q8WWY7 111 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 TMBIM4Q9HC24 238 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 CYSLTR2Q9NS75 346 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 EIF3KQ9UBQ5 218 aaKnown RBP15.06■□□□□ 0
TSPAN3-208ENST00000560514 OR5V1Q9UGF6 321 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 CMYA5Q8N3K9 4069 aa15.06■□□□□ 0
TSPAN3-208ENST00000560514 C5orf58C9J3I9 102 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 TRAPPC2LH3BP13 241 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 PLPP3O14495 311 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 ALX3O95076 343 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 MFN2O95140 757 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 TGDSO95455 350 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 BGLAPP02818 100 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 MRPL19P49406 292 aaKnown RBP15.05■□□□□ -0
TSPAN3-208ENST00000560514 POLR2JP52435 117 aaKnown RBP15.05■□□□□ -0
TSPAN3-208ENST00000560514 HSF2Q03933 536 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 PARP8Q8N3A8 854 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 OR4K5Q8NGD3 323 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 TMEM54Q969K7 222 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 ZDHHC16Q969W1 377 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 ZNF566Q969W8 418 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 TMEM27Q9HBJ8 222 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 EGFL7Q9UHF1 273 aa15.05■□□□□ -0
TSPAN3-208ENST00000560514 POLR3KQ9Y2Y1 108 aaPredicted RBP15.05■□□□□ -0
TSPAN3-208ENST00000560514 IGHV3OR16-10A0A075B7F0 116 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 DHHO43323 396 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 RAG2P55895 527 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 ESCO2Q56NI9 601 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 ZMAT1Q5H9K5 638 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 BEND6Q5SZJ8 279 aaPredicted RBP15.04■□□□□ -0
TSPAN3-208ENST00000560514 EPGNQ6UW88 154 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 SLC35D2Q76EJ3 337 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 JAZF1Q86VZ6 243 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 HIPK4Q8NE63 616 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 OR6X1Q8NH79 312 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 BBS10Q8TAM1 723 aa15.04■□□□□ -0
TSPAN3-208ENST00000560514 MOGAT1Q96PD6 335 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms