RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SEPHS2Q99611 448 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 PRSS27Q9BQR3 290 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 ALG12Q9BV10 488 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 FNDC11Q9BVV2 318 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 ZNF416Q9BWM5 594 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 BPESC1Q9GZL8 116 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 COL6A5A8TX70 2615 aa12.15□□□□□ -0.46
TPM1-223ENST00000560445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.465e-6■■■□□ 16.3
TPM1-223ENST00000560445 SH3PXD2BA1X283 911 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 GMNNO75496 209 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 LY6HO94772 140 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 THY1P04216 161 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 SAGP10523 405 aaPredicted RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 SRD5A1P18405 259 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 APLNRP35414 380 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 CRYBA2P53672 197 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 UGT2B15P54855 530 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 PCBD1P61457 104 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 MRPS34P82930 218 aaKnown RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 TEKQ02763 1124 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 SCGB2A2Q13296 93 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 PIN1Q13526 163 aaPredicted RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 RAB39AQ14964 217 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 FXNQ16595 210 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 HIST3H3Q16695 136 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 NKPD1Q17RQ9 610 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 PCGF3Q3KNV8 242 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 ALG10Q5BKT4 473 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 C10orf128Q5T292 105 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 CGB2Q6NT52 195 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 LRFN4Q6PJG9 635 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 RRM2BQ7LG56 351 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 LSRQ86X29 649 aaPredicted RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 ALDH16A1Q8IZ83 802 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 RNF113BQ8IZP6 322 aaKnown RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 ASB10Q8WXI3 467 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 C11orf40Q8WZ69 217 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 BPIFA2Q96DR5 249 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 RBP7Q96R05 134 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 CHODLQ9H9P2 273 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 EFCAB1Q9HAE3 211 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 SIAEQ9HAT2 523 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 KRCC1Q9NPI7 259 aaPredicted RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 MEPEQ9NQ76 525 aaPredicted RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
TPM1-223ENST00000560445 ADAM21Q9UKJ8 722 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 HIF3AQ9Y2N7 669 aa12.14□□□□□ -0.47
TPM1-223ENST00000560445 F13BP05160 661 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 TACSTD2P09758 323 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 DRD4P21917 467 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ACHEP22303 614 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 SLC9A3P48764 834 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ZNF133P52736 654 aaPredicted RBP12.13□□□□□ -0.47
TPM1-223ENST00000560445 KLF3P57682 345 aaPredicted RBP12.13□□□□□ -0.47
TPM1-223ENST00000560445 CD47Q08722 323 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 TRAM2Q15035 370 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 IFI44LQ53G44 452 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 THEM4Q5T1C6 240 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 TMEM154Q6P9G4 183 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ARL9Q6T311 187 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 CPEB3Q8NE35 698 aaKnown RBP12.13□□□□□ -0.47
TPM1-223ENST00000560445 PFN4Q8NHR9 129 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ZNF519Q8TB69 540 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 RDH5Q92781 318 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 RCN3Q96D15 328 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 CMTM5Q96DZ9 223 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ZNF75AQ96N20 296 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 WACQ9BTA9 647 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 MRPL13Q9BYD1 178 aaKnown RBP12.13□□□□□ -0.47
TPM1-223ENST00000560445 MRPL37Q9BZE1 423 aaKnown RBP12.13□□□□□ -0.47
TPM1-223ENST00000560445 TXNIPQ9H3M7 391 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ANKRD19PQ9H560 264 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 ZNF224Q9NZL3 707 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 DUSP13Q9UII6 198 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 TMEM5Q9Y2B1 443 aa12.13□□□□□ -0.47
TPM1-223ENST00000560445 IGHV4-61A0A0C4DH41 118 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 TMEM129A0AVI4 362 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 RNF212BA8MTL3 300 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 TRMUO75648 421 aaKnown RBP12.12□□□□□ -0.47
TPM1-223ENST00000560445 TGFAP01135 160 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 TSPAN19P0C672 248 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 IFI30P13284 250 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 APEX1P27695 318 aaKnown RBP12.12□□□□□ -0.47
TPM1-223ENST00000560445 AQP2P41181 271 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 OR1E2P47887 323 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 ZMAT1Q5H9K5 638 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 HACD2Q6Y1H2 254 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 FKBP9P1Q75LS8 142 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 NKAIN4Q8IVV8 208 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 LINC01356Q8N9X3 169 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 SYT14Q8NB59 555 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 SYNPRQ8TBG9 265 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 SH3GL3Q99963 347 aa12.12□□□□□ -0.47
TPM1-223ENST00000560445 SYT3Q9BQG1 590 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms