RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SF3B5Q9BWJ5 86 aaKnown RBP9.49□□□□□ -0.89
CRTC3-209ENST00000560320 NUAK2Q9H093 628 aa9.49□□□□□ -0.89
CRTC3-209ENST00000560320 TSPAN10Q9H1Z9 355 aaPredicted RBP9.49□□□□□ -0.89
CRTC3-209ENST00000560320 WDR76Q9H967 626 aa9.49□□□□□ -0.89
CRTC3-209ENST00000560320 MED29Q9NX70 200 aa9.49□□□□□ -0.89
CRTC3-209ENST00000560320 PAQR5Q9NXK6 330 aaPredicted RBP9.49□□□□□ -0.89
CRTC3-209ENST00000560320 BABAM2Q9NXR7 383 aa9.49□□□□□ -0.89
CRTC3-209ENST00000560320 LAMP5Q9UJQ1 280 aa9.49□□□□□ -0.89
CRTC3-209ENST00000560320 ALPK2Q86TB3 2170 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 DNAJC13O75165 2243 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TNRC6AQ8NDV7 1962 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 LOC100506127A0A0U1RQW1 187 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 A0A1W2PQL4 384 aaPredicted RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 SLC35F4A4IF30 521 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TVP23AA6NH52 213 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TFECO14948 347 aaPredicted RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TRAF3IP2O43734 574 aaPredicted RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 CXCL13O43927 109 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TMCC2O75069 709 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 KRT8P05787 483 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 GUCA1AP43080 201 aaPredicted RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 STARP49675 285 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 P2RY4P51582 365 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 GFRA1P56159 465 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 CLDN17P56750 224 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 CLDN20P56880 219 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 LSM3P62310 102 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 H3F3AP84243 136 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 ZNF85Q03923 595 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 NFATC3Q12968 1075 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 MRPL28Q13084 256 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 GPR50Q13585 617 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TPBGQ13641 420 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 TRAM1Q15629 374 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 BCL2A1Q16548 175 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 LINC01590Q5TEZ4 76 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 LIPKQ5VXJ0 399 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 LRRC69Q6ZNQ3 347 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 SLC16A12Q6ZSM3 486 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 USP43Q70EL4 1123 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 KCTD20Q7Z5Y7 419 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 KLBQ86Z14 1044 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 EGFL6Q8IUX8 553 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 PHC2Q8IXK0 858 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 OR6N1Q8NGY5 312 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 OR10D3Q8NH80 312 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 ASB17Q8WXJ9 295 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 INTS12Q96CB8 462 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 C4orf36Q96KX1 117 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 KCNK17Q96T54 332 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 SMAD5Q99717 465 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 CHCHD6Q9BRQ6 235 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 DCUN1D5Q9BTE7 237 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 EMC6Q9BV81 110 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 PRRG4Q9BZD6 226 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 SLC6A15Q9H2J7 730 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 CCDC86Q9H6F5 360 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 ACKR4Q9NPB9 350 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 NDUFB11Q9NX14 153 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 KLHL13Q9P2N7 655 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 B3GAT1Q9P2W7 334 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 MCTS1Q9ULC4 181 aaKnown RBP9.48□□□□□ -0.89
CRTC3-209ENST00000560320 STUB1Q9UNE7 303 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 GSTK1Q9Y2Q3 226 aa9.48□□□□□ -0.89
CRTC3-209ENST00000560320 IGLV1-36A0A0B4J1U3 117 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 TRGV5A0A0B4J1U4 118 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 IGHV3-15A0A0B4J1V0 119 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 PNMA8CA0A1B0GUJ8 204 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 HSPB2A8KAH6 182 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 MKRN2OSH3BPM6 223 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 ATXN7O15265 892 aaPredicted RBP9.47□□□□□ -0.89
CRTC3-209ENST00000560320 ATE1O95260 518 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 TFP02787 698 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CTLA4P16410 223 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 GABRA5P31644 462 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CSNK1A1P48729 337 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 ENTPD1P49961 510 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CLDN15P56746 228 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 VBP1P61758 197 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 TUBA1BP68363 451 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 SRYQ05066 204 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CAMK2DQ13557 499 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 HSPB2Q16082 182 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CTF1Q16619 201 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 DGUOKQ16854 277 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CDONQ4KMG0 1287 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CARD17Q5XLA6 110 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 VASNQ6EMK4 673 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 SLC18B1Q6NT16 456 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 ZNF544Q6NX49 715 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 KCTD18Q6PI47 426 aaPredicted RBP9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CREB3L2Q70SY1 520 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 TUBA1AQ71U36 451 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 VASH1Q7L8A9 365 aaPredicted RBP9.47□□□□□ -0.89
CRTC3-209ENST00000560320 GGNQ86UU5 652 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 CDC20BQ86Y33 519 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 GLB1L2Q8IW92 636 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 TIGD4Q8IY51 512 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
CRTC3-209ENST00000560320 OR9K2Q8NGE7 335 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms