RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	SMPD3	Q9NY59	655 aa	Predicted RBP	10.79	□□□□□ -0.68
USP8-209	ENST00000560297	NDRG3	Q9UGV2	375 aa		10.79	□□□□□ -0.68
USP8-209	ENST00000560297	UBR5	O95071	2799 aa	Predicted RBP	10.79	□□□□□ -0.68
USP8-209	ENST00000560297		H0YJX3	145 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	SURF4	O15260	269 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	SLC16A7	O60669	478 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	KHDRBS3	O75525	346 aa	Known RBP	10.78	□□□□□ -0.68
USP8-209	ENST00000560297	LYZL6	O75951	148 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	RNF224	P0DH78	156 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	NPR2	P20594	1047 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	PAX7	P23759	505 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	EPHA2	P29317	976 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	ARF1	P84077	181 aa	Known RBP	10.78	□□□□□ -0.68
USP8-209	ENST00000560297	GABRA6	Q16445	453 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	ZIK1	Q3SY52	487 aa	Predicted RBP	10.78	□□□□□ -0.68
USP8-209	ENST00000560297	C17orf78	Q8N4C9	275 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	SLC37A3	Q8NCC5	494 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	TRUB1	Q8WWH5	349 aa	Known RBP	10.78	□□□□□ -0.68
USP8-209	ENST00000560297	HSD17B8	Q92506	261 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	ZNF837	Q96EG3	531 aa	Predicted RBP	10.78	□□□□□ -0.68
USP8-209	ENST00000560297	HRASLS5	Q96KN8	279 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	FOXB1	Q99853	325 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	NUAK2	Q9H093	628 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	SYT4	Q9H2B2	425 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	RASSF4	Q9H2L5	321 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	FN3K	Q9H479	309 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	SRA1	Q9HD15	236 aa	Known RBP	10.78	□□□□□ -0.68
USP8-209	ENST00000560297	TVP23B	Q9NYZ1	205 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	FKBP7	Q9Y680	259 aa		10.78	□□□□□ -0.68
USP8-209	ENST00000560297	OR6C68	A6NDL8	312 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297		H7C1C5	153 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	SLC16A6	O15403	523 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	SLC2A10	O95528	541 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	SNAP29	O95721	258 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	OR8G3P	P0DMU2	310 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	HOXC12	P31275	282 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	CENPA	P49450	140 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	SLC25A1	P53007	311 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	FOXG1	P55316	489 aa	Predicted RBP	10.77	□□□□□ -0.69
USP8-209	ENST00000560297	CDC42	P60953	191 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	LCN6	P62502	163 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	MRPS34	P82930	218 aa	Known RBP	10.77	□□□□□ -0.69
USP8-209	ENST00000560297	TIMM23B	Q5SRD1	257 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	C9orf135	Q5VTT2	229 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	C12orf73	Q69YU5	71 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	ZBTB46	Q86UZ6	589 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	OR6V1	Q8N148	313 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	ZNF555	Q8NEP9	628 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	SDR9C7	Q8NEX9	313 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	OR1K1	Q8NGR3	316 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	OR2T4	Q8NH00	348 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	NSMAF	Q92636	917 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	BCL2L2	Q92843	193 aa	Predicted RBP	10.77	□□□□□ -0.69
USP8-209	ENST00000560297	MUCL1	Q96DR8	90 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	ACTR6	Q9GZN1	396 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	RACGAP1	Q9H0H5	632 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	OBP2B	Q9NPH6	170 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	RPRD1B	Q9NQG5	326 aa	Known RBP	10.77	□□□□□ -0.69
USP8-209	ENST00000560297	TMEM38B	Q9NVV0	291 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	FAM118A	Q9NWS6	357 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	B9D1	Q9UPM9	204 aa		10.77	□□□□□ -0.69
USP8-209	ENST00000560297	IGKV1D-43	A0A0B4J1Z2	117 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	LOC100130705	A0A1B0GUX0	176 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	TUBAL3	A6NHL2	446 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	OR5H1	A6NKK0	313 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	PRSS44	E7EML9	344 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	PRR23D1	E9PI22	279 aa	Predicted RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297		E9PQ18	207 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	DLGAP1	O14490	977 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	RAD51D	O75771	328 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	FARS2	O95363	451 aa	Known RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	PRR23D2	P0DMB1	279 aa	Predicted RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	CTLA4	P16410	223 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	LAP3	P28838	519 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	GGT2	P36268	569 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	PTDSS1	P48651	473 aa	Known RBP	10.76	□□□□□ -0.69
USP8-209	ENST00000560297	BLVRA	P53004	296 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	EFNB1	P98172	346 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	GLO1	Q04760	184 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	FMOD	Q06828	376 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	CRMP1	Q14194	572 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	TTC23	Q5W5X9	447 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	KLHL24	Q6TFL4	600 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	ZNF813	Q6ZN06	617 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	DPPA2	Q7Z7J5	298 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	GLB1L2	Q8IW92	636 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	DEPDC4	Q8N2C3	294 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	SLC22A24	Q8N4F4	322 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	DHRSX	Q8N5I4	330 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	CYB561A3	Q8NBI2	242 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	OR8J1	Q8NGP2	316 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	NRG4	Q8WWG1	115 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	PTP4A1	Q93096	173 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	S100PBP	Q96BU1	408 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	DACH2	Q96NX9	599 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	PSMG3-AS1	Q96PY0	264 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	MBOAT4	Q96T53	435 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	SPOCK3	Q9BQ16	436 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	WAC	Q9BTA9	647 aa		10.76	□□□□□ -0.69
USP8-209	ENST00000560297	NMNAT2	Q9BZQ4	307 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms