RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 NR1H2P55055 460 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 GLO1Q04760 184 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
HERC1-205ENST00000559886 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
HERC1-205ENST00000559886 XAF1Q6GPH4 301 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 SLC25A47Q6Q0C1 308 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 MCEMP1Q8IX19 187 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 OR6N1Q8NGY5 312 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 TRIB1Q96RU8 372 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 CNN2Q99439 309 aaKnown RBP10.8□□□□□ -0.68
HERC1-205ENST00000559886 MARCH7Q9H992 704 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 CALHM2Q9HA72 323 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 ASF1BQ9NVP2 202 aa10.8□□□□□ -0.68
HERC1-205ENST00000559886 COA3Q9Y2R0 106 aaPredicted RBP10.8□□□□□ -0.68
HERC1-205ENST00000559886 NOSIPQ9Y314 301 aaKnown RBP10.8□□□□□ -0.68
HERC1-205ENST00000559886 SLC43A1O75387 559 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 MRPL3P09001 348 aaKnown RBP10.79□□□□□ -0.68
HERC1-205ENST00000559886 QDPRP09417 244 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 MAP2K4P45985 399 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■■■■ 28.8
HERC1-205ENST00000559886 TBCEQ15813 527 aaPredicted RBP10.79□□□□□ -0.68
HERC1-205ENST00000559886 PHYHD1Q5SRE7 291 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 P4HA3Q7Z4N8 544 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 TIGD4Q8IY51 512 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 ACBD7Q8N6N7 88 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 ACOT13Q9NPJ3 140 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 GLRX2Q9NS18 164 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 PARPBPQ9NWS1 579 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 TAS2R16Q9NYV7 291 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 CLEC4AQ9UMR7 237 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 EXOSC1Q9Y3B2 195 aaKnown RBP10.79□□□□□ -0.68
HERC1-205ENST00000559886 NBEAQ8NFP9 2946 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 SELENOFO60613 162 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 MRPL33O75394 65 aaKnown RBP10.79□□□□□ -0.68
HERC1-205ENST00000559886 GPANK1O95872 356 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 GABRA1P14867 456 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 JUNBP17275 347 aaPredicted RBP10.79□□□□□ -0.68
HERC1-205ENST00000559886 MYL12AP19105 171 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 RPL5P46777 297 aaKnown RBP10.79□□□□□ -0.68
HERC1-205ENST00000559886 ETV1P50549 477 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 ZNF585AQ6P3V2 769 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 PCSK4Q6UW60 755 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 FAM57AQ8TBR7 257 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 WNT2BQ93097 391 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 ZNF649Q9BS31 505 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 CLEC2DQ9UHP7 191 aa10.79□□□□□ -0.68
HERC1-205ENST00000559886 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 CD8B2A6NJW9 211 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 C12orf71A8MTZ7 269 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 WDR1O75083 606 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 TFP02787 698 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 OR2T7P0C7T2 308 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 LIMS3P0CW19 117 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 LIMS4P0CW20 117 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 PTGER4P35408 488 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 NAA10P41227 235 aaPredicted RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 ALDH3B2P48448 385 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 HSF2Q03933 536 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 LY6DQ14210 128 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 NEDD8Q15843 81 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 C10orf128Q5T292 105 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 NSUN5P2Q63ZY6 315 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 GLB1L2Q8IW92 636 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 SLC26A10Q8NG04 563 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 OR2T27Q8NH04 317 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 NSMAFQ92636 917 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 GMPPAQ96IJ6 420 aaPredicted RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 FOXN4Q96NZ1 517 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 INPP5EQ9NRR6 644 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 MRPL22Q9NWU5 206 aaKnown RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 ERGIC3Q9Y282 383 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 SS18L1O75177 396 aaPredicted RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 HLA-DQA2P01906 255 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 TPOP07202 933 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 GAAP10253 952 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 AGTR1P30556 359 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 ACTC1P68032 377 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 ACTA1P68133 377 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 RIPPLY2Q5TAB7 128 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 RPTNQ6XPR3 784 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 ERI1Q8IV48 349 aaKnown RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 NANOGP1Q8N7R0 232 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 OR10H4Q8NGA5 316 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 SMAP2Q8WU79 429 aaPredicted RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 WBP1Q96G27 269 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 WDR76Q9H967 626 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 CHCHD3Q9NX63 227 aaKnown RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 ERVK13-1Q9NX77 482 aa10.78□□□□□ -0.68
HERC1-205ENST00000559886 NCOA6Q14686 2063 aaPredicted RBP10.78□□□□□ -0.68
HERC1-205ENST00000559886 CACNA1CQ13936 2221 aa10.77□□□□□ -0.68
HERC1-205ENST00000559886 USP24Q9UPU5 2620 aa10.77□□□□□ -0.68
HERC1-205ENST00000559886 FIGNL2A6NMB9 653 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 UPK3AO75631 287 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 PTHP01270 115 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 HRGP04196 525 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 ABOP16442 354 aa10.77□□□□□ -0.69
HERC1-205ENST00000559886 LAP3P28838 519 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms