RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ACACBO00763 2458 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC35F4A4IF30 521 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF716A6NP11 495 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC22A1O15245 554 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 DNPH1O43598 174 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 EIF1BO60739 113 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 S100A1P23297 94 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 LIPAP38571 399 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 NAA10P41227 235 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 DAP3P51398 398 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF85Q03923 595 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 SRYQ05066 204 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF169Q14929 603 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC16A12Q6ZSM3 486 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 C9orf43Q8TAL5 461 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 TM9SF4Q92544 642 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 ABHD17AQ96GS6 310 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 COPS3Q9UNS2 423 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
RABGGTA-209ENST00000559551 TVP23AA6NH52 213 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 PRR32B1ATL7 298 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 ACOT7O00154 380 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 XKRYO14609 159 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 RRP8O43159 456 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 LALBAP00709 142 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 RENP00797 406 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 IGHG3P01860 377 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 PGA4P0DJD7 388 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 PGA3P0DJD8 388 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 PSMB9P28065 219 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 AQP6Q13520 282 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 PON3Q15166 354 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 POU4F3Q15319 338 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC35D3Q5M8T2 416 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 SIAH3Q8IW03 269 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 OR9K2Q8NGE7 335 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 OR6K6Q8NGW6 343 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 YIPF6Q96EC8 236 aa12.71□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC16A7O60669 478 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF43P17038 809 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 DGUOKQ16854 277 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 TIGD4Q8IY51 512 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 CADM3Q8N126 398 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 PROKR2Q8NFJ6 384 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 WDYHV1Q96HA8 205 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 OPALINQ96PE5 141 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 RERGLQ9H628 205 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 MRPL22Q9NWU5 206 aaKnown RBP12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 LHX6Q9UPM6 363 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 FKBP7Q9Y680 259 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 EPG5Q9HCE0 2579 aa12.71□□□□□ -0.38
RABGGTA-209ENST00000559551 TRGV5A0A0B4J1U4 118 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 A6NIZ1 184 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 MAGEB4O15481 346 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF432O94892 652 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 GABARAPO95166 117 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 RPS27P42677 84 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 CLDN17P56750 224 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 RAP1BP61224 184 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 RAP1AP62834 184 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 MED22Q15528 200 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 NDUFA5Q16718 116 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 TIGD6Q17RP2 521 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 PHYHD1Q5SRE7 291 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 OR2T4Q8NH00 348 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 OR6X1Q8NH79 312 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 CRELD1Q96HD1 420 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 NAA11Q9BSU3 229 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 TTTY10Q9BZA0 68 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 WDR76Q9H967 626 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 MARCH7Q9H992 704 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 LUZP4Q9P127 313 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 ZMIZ1Q9ULJ6 1067 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 TP53TG5Q9Y2B4 290 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 KLHDC2Q9Y2U9 406 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 EXOSC1Q9Y3B2 195 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 RTTNQ86VV8 2226 aa12.7□□□□□ -0.38
RABGGTA-209ENST00000559551 A0A1W2PQL4 384 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 TMEM129A0AVI4 362 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 TFECO14948 347 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 LRRTM2O43300 516 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 MPZL1O95297 269 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 ACTL6AO96019 429 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 PTGS2P35354 604 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 LGALS3BPQ08380 585 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 C1DQ13901 141 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 SPHARQ15513 63 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 SSX1Q16384 188 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 CTF1Q16619 201 aa12.69□□□□□ -0.38
RABGGTA-209ENST00000559551 HIST3H3Q16695 136 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms