RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 UBE2MP61081 183 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 TIMM10P62072 90 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 ERVK-25P63136 954 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 PAX5Q02548 391 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 SLC25A11Q02978 314 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 CKAP4Q07065 602 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 ECH1Q13011 328 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 AQP6Q13520 282 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 GGTLC2Q14390 218 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 SGCAQ16586 387 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 GUCA2BQ16661 112 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 ZSCAN26Q16670 478 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 RSPO1Q2MKA7 263 aaPredicted RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 ZBED5Q49AG3 693 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 HIKESHIQ53FT3 197 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 LRRC10Q5BKY1 277 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 EOGTQ5NDL2 527 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 PIP5KL1Q5T9C9 394 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 FHL5Q5TD97 284 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 TWF2Q6IBS0 349 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 C6orf89Q6UWU4 347 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 CCDC73Q6ZRK6 1079 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 SH2D6Q7Z4S9 175 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 TMCO2Q7Z6W1 182 aaPredicted RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 SCD5Q86SK9 330 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 LUZP2Q86TE4 346 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 IQCKQ8N0W5 287 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 SPAG16Q8N0X2 631 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 PDIK1LQ8N165 341 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 GABRG1Q8N1C3 465 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 PQLC3Q8N755 202 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 PRELID2Q8N945 189 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 DCAF4L2Q8NA75 395 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 VN1R2Q8NFZ6 395 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 NPBQ8NG41 125 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 OR2L5Q8NG80 312 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 OR4F15Q8NGB8 312 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 RHEBL1Q8TAI7 183 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 NUBPLQ8TB37 319 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 MARCH1Q8TCQ1 289 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 CXorf40AQ8TE69 158 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 IL22RA2Q969J5 263 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 DNAJC19Q96DA6 116 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 ECHDC3Q96DC8 303 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 B3GALT6Q96L58 329 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 ZIM3Q96PE6 472 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 OR2M2Q96R28 347 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 BCL7BQ9BQE9 202 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 MTG1Q9BT17 334 aaPredicted RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 GABARAPL3Q9BY60 117 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 OR11A1Q9GZK7 315 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 DNTTIP1Q9H147 329 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 OR2AG1Q9H205 316 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 NCOR1P1Q9H4R4 102 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 RPF2Q9H7B2 306 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 AUNIPQ9H7T9 357 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 MRPL47Q9HD33 250 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 LYRM4Q9HD34 91 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 CCNB1IP1Q9NPC3 277 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 IL26Q9NPH9 171 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 MMP26Q9NRE1 261 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 ABCB10Q9NRK6 738 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 GPATCH2LQ9NWQ4 482 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 DEC1Q9P2X7 70 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 GNPTGQ9UJJ9 305 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 PSME2Q9UL46 239 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 ST3GAL6Q9Y274 331 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 TP53TG5Q9Y2B4 290 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 RHBDD3Q9Y3P4 386 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 HEBP2Q9Y5Z4 205 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 MRPS18BQ9Y676 258 aaKnown RBP1.12□□□□□ -2.23
USP3-209ENST00000558925 UBN2Q6ZU65 1347 aa1.12□□□□□ -2.23
USP3-209ENST00000558925 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 CEMIPQ8WUJ3 1361 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 USP47Q96K76 1375 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 NUP214P35658 2090 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 A0A1B0GTQ1 180 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 CCDC182A6NF36 153 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 H0YHG0 523 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 H0YIV9 168 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SIRPB1O00241 398 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SLC9A3R1O14745 358 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 CASQ2O14958 399 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 CASC3O15234 703 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 CD5LO43866 347 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 MGRN1O60291 552 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 EIF4E2O60573 245 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 SUPT3HO75486 399 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SCELO95171 688 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 C6orf47O95873 294 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OXTP01178 125 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 IGLV2-23P01705 113 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 KRTAP1-4P0C5Y4 121 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 IGHV3-43DP0DP04 118 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 ZNF30P17039 623 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 GSTM3P21266 225 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 CMA1P23946 247 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OR1E1P30953 314 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OTX1P32242 354 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 HRH1P35367 487 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms