RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 CCL4L1Q8NHW4 92 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 OTOSQ8NHW6 89 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 FBXW5Q969U6 566 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 TSSK2Q96PF2 358 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 OR8B4Q96RC9 309 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 GABRG3Q99928 467 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 EDEM2Q9BV94 578 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 POFUT1Q9H488 388 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 FKRPQ9H9S5 495 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 PCDHB16Q9NRJ7 776 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 CKLFQ9UBR5 152 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 TRAV14DV4A0A0A6YYC5 116 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 TCRBV16S1A1N1A0A5B0 115 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 MEGF11A6BM72 1044 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 TEX46H3BTG2 121 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 AKR7A3O95154 331 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 SPDEFO95238 335 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 RLN2P04090 185 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 PVRP15151 417 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 HLA-GP17693 338 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 FSTP19883 344 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 NTSR1P30989 418 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 YPEL5P62699 121 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 FLI1Q01543 452 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-231ENST00000557433 BIKQ13323 160 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 ETFDHQ16134 617 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 MESTQ5EB52 335 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 OR5M8Q8NGP6 311 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 OR10K1Q8NGX5 313 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 DUSP19Q8WTR2 217 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 TSACCQ96A04 125 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-231ENST00000557433 ZNF587Q96SQ5 575 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-231ENST00000557433 LPAR4Q99677 370 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 UBQLN4Q9NRR5 601 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 HRASLS2Q9NWW9 162 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 COMMD9Q9P000 198 aa14.74□□□□□ -0.05
SHMT2-231ENST00000557433 BCL2L11O43521 198 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 CD74P04233 296 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 CD2P06729 351 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 ITGA5P08648 1049 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 KIR3DL2P43630 455 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 STARP49675 285 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 EFNB2P52799 333 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 RPL18Q07020 188 aaKnown RBP14.73□□□□□ -0.05
SHMT2-231ENST00000557433 PLA2G7Q13093 441 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 MEF2DQ14814 521 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 GRM7Q14831 915 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 SLC17A1Q14916 467 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 CCDC157Q569K6 752 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 WDR38Q5JTN6 314 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 LY6G6FQ5SQ64 297 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 TMEM184AQ6ZMB5 413 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 ARHGEF39Q8N4T4 335 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 OR9A4Q8NGU2 314 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 PTX4Q96A99 478 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 TSPAN32Q96QS1 320 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 MS4A7Q9GZW8 240 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-231ENST00000557433 ATG5Q9H1Y0 275 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 PIGMQ9H3S5 423 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 PRTFDC1Q9NRG1 225 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 CPNE7Q9UBL6 633 aa14.73□□□□□ -0.05
SHMT2-231ENST00000557433 A0A087WV48 116 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 KIR2DS5A0A0G2JLQ3 304 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 A0A0G2JNG1 304 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-231ENST00000557433 KIR2DS3K7RE56 304 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 NUDT21O43809 227 aaKnown RBP14.72□□□□□ -0.05
SHMT2-231ENST00000557433 APOC3P02656 99 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 MPZP25189 248 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 UBE2IP63279 158 aaKnown RBP14.72□□□□□ -0.05
SHMT2-231ENST00000557433 GUCA2AQ02747 115 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 SKP2Q13309 424 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 KIR2DS5Q14953 304 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 TEX30Q5JUR7 227 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 ARHGAP40Q5TG30 622 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 LRFN4Q6PJG9 635 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 DPY19L4Q7Z388 723 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 STEAP2Q8NFT2 490 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 C16orf52Q8NHV5 167 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 RNF128Q8TEB7 428 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 SEH1LQ96EE3 360 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 MOGAT1Q96PD6 335 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 OR10A5Q9H207 317 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 SEMA6CQ9H3T2 930 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 TNFSF18Q9UNG2 199 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 DTX4Q9Y2E6 619 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 TVP23AA6NH52 213 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 OR5H14A6NHG9 310 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 H0YC42 278 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 DNASE2O00115 360 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-231ENST00000557433 DCTN6O00399 190 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 DOK2O60496 412 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 HPGDP15428 266 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 CNR1P21554 472 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 HNRNPA2B1P22626 353 aaKnown RBP14.72□□□□□ -0.05
SHMT2-231ENST00000557433 SLC6A8P48029 635 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 ROM1Q03395 351 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 VWA2Q5GFL6 755 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 SLC18B1Q6NT16 456 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 ZNF679Q8IYX0 411 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms