RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MYEF2Q9P2K5 600 aaKnown RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 DUSP13Q9UII6 198 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 ZNF346Q9UL40 294 aaKnown RBP12.17□□□□□ -0.46
SNX6-210ENST00000557341 MED31Q9Y3C7 131 aa12.17□□□□□ -0.46
SNX6-210ENST00000557341 FAM220BPB1ANY3 271 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 LYNX1G3V0Z9 82 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 SNAP29O95721 258 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 PTHP01270 115 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 FAM157BP0CG42 384 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 LYNX1P0DP58 116 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 ACADSP16219 412 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 FUT1P19526 365 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 TCN1P20061 433 aaPredicted RBP12.16□□□□□ -0.46
SNX6-210ENST00000557341 ACHEP22303 614 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 OR1E2P47887 323 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 CDH15P55291 814 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 SELENOVP59797 346 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 MYBPC1Q00872 1141 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 RUNX1T1Q06455 604 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 PIN1Q13526 163 aaPredicted RBP12.16□□□□□ -0.46
SNX6-210ENST00000557341 CCNIQ14094 377 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 NKPD1Q17RQ9 610 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 ELFN2Q5R3F8 820 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 SYT14Q8NB59 555 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 C10orf82Q8WW14 230 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 ZNF583Q96ND8 569 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 MRPL13Q9BYD1 178 aaKnown RBP12.16□□□□□ -0.46
SNX6-210ENST00000557341 SAR1AQ9NR31 198 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 GID8Q9NWU2 228 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 GPR160Q9UJ42 338 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 RIMS3Q9UJD0 308 aa12.16□□□□□ -0.46
SNX6-210ENST00000557341 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 NPIPB13A6NJU9 1138 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 NPIPB4C9JG80 1138 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 MGRN1O60291 552 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 TRMUO75648 421 aaKnown RBP12.15□□□□□ -0.46
SNX6-210ENST00000557341 HPXP02790 462 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 TSPAN19P0C672 248 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 NAT2P11245 290 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 NR2C1P13056 603 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 CCL2P13500 99 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 AQP2P41181 271 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 GPR6P46095 362 aaPredicted RBP12.15□□□□□ -0.46
SNX6-210ENST00000557341 ZNF133P52736 654 aaPredicted RBP12.15□□□□□ -0.46
SNX6-210ENST00000557341 SEC24CP53992 1094 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 KLF3P57682 345 aaPredicted RBP12.15□□□□□ -0.46
SNX6-210ENST00000557341 PLP2Q04941 152 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 CYBRD1Q53TN4 286 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 C10orf128Q5T292 105 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 LRRC18Q8N456 261 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 PAQR4Q8N4S7 273 aaPredicted RBP12.15□□□□□ -0.46
SNX6-210ENST00000557341 OR2T12Q8NG77 320 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 OR1J2Q8NGS2 313 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 SNX33Q8WV41 574 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 LIPHQ8WWY8 451 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 RDH5Q92781 318 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 PRRC1Q96M27 445 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 LRMDAQ9H2I8 198 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 OR51B6Q9H340 312 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 SMURF2Q9HAU4 748 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 CAPN7Q9Y6W3 813 aa12.15□□□□□ -0.46
SNX6-210ENST00000557341 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 GMNCA6NCL1 334 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 NCR1O76036 304 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 SLC2A10O95528 541 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 LCKP06239 509 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 MMP7P09237 267 aaPredicted RBP12.14□□□□□ -0.47
SNX6-210ENST00000557341 SAGP10523 405 aaPredicted RBP12.14□□□□□ -0.47
SNX6-210ENST00000557341 PCMT1P22061 227 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 IFNA8P32881 189 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 KDELR2P33947 212 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 MRPS11P82912 194 aaKnown RBP12.14□□□□□ -0.47
SNX6-210ENST00000557341 MRPS34P82930 218 aaKnown RBP12.14□□□□□ -0.47
SNX6-210ENST00000557341 HSF2Q03933 536 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 CD47Q08722 323 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 ST3GAL3Q11203 375 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 SF3A3Q12874 501 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNX6-210ENST00000557341 ALKBH6Q3KRA9 238 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 CGB2Q6NT52 195 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 MOSPD2Q8NHP6 518 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 ZNF519Q8TB69 540 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 SYNPRQ8TBG9 265 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 C1orf159Q96HA4 380 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 TPD52L3Q96J77 140 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 ZNF416Q9BWM5 594 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 BCL2L14Q9BZR8 327 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 KCNN2Q9H2S1 579 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 CCNB1IP1Q9NPC3 277 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 ZNF275Q9NSD4 429 aaPredicted RBP12.14□□□□□ -0.47
SNX6-210ENST00000557341 TMEFF2Q9UIK5 374 aaPredicted RBP12.14□□□□□ -0.47
SNX6-210ENST00000557341 HIF3AQ9Y2N7 669 aa12.14□□□□□ -0.47
SNX6-210ENST00000557341 ANK2Q01484 3957 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 LOC100653049A0A140TA62 436 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 ELOVL7A1L3X0 281 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 HTR3EA5X5Y0 456 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 C17orf100A8MU93 164 aa12.13□□□□□ -0.47
SNX6-210ENST00000557341 B4DSR2 109 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms