RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 POLR2J3Q9H1A7 115 aaKnown RBP13.61□□□□□ -0.23
TUBB3-213ENST00000557262 LRMDAQ9H2I8 198 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF275Q9NSD4 429 aaPredicted RBP13.61□□□□□ -0.23
TUBB3-213ENST00000557262 BAG5Q9UL15 447 aa13.61□□□□□ -0.23
TUBB3-213ENST00000557262 IQCMA0A1B0GVH7 501 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 MCIDASD6RGH6 385 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 TRMUO75648 421 aaKnown RBP13.6□□□□□ -0.23
TUBB3-213ENST00000557262 OR7A10O76100 309 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 SNAP29O95721 258 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 CLPTM1O96005 669 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 IGF2P01344 180 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 LCKP06239 509 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 ACADSP16219 412 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 UCP2P55851 309 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 TAS2R41P59536 307 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 RUNX1T1Q06455 604 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 TBC1D28Q2M2D7 210 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 RABL3Q5HYI8 236 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 HDDC2Q7Z4H3 204 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 GLCCI1Q86VQ1 547 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 CALHM3Q86XJ0 350 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 NKAIN4Q8IVV8 208 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 SYT14Q8NB59 555 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 RBM15BQ8NDT2 890 aaKnown RBP13.6□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF519Q8TB69 540 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 LIPHQ8WWY8 451 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 ASB10Q8WXI3 467 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 LRRC58Q96CX6 371 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 SGTBQ96EQ0 304 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 SEPHS2Q99611 448 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF416Q9BWM5 594 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 BCL2L14Q9BZR8 327 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 KCNN2Q9H2S1 579 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 HINT3Q9NQE9 182 aaKnown RBP13.6□□□□□ -0.23
TUBB3-213ENST00000557262 INIPQ9NRY2 104 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 SLCO1C1Q9NYB5 712 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 RIMS3Q9UJD0 308 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
TUBB3-213ENST00000557262 IGLV3-9A0A075B6K5 115 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 C17orf100A8MU93 164 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 PPIHO43447 177 aaKnown RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 NCR1O76036 304 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 OR5F1O95221 314 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 NPPAP01160 153 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 IFNA14P01570 189 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 TFP02787 698 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 SAGP10523 405 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 AQP2P41181 271 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 MAGEB1P43366 347 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 DAP3P51398 398 aaKnown RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 ZNF133P52736 654 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 KLF3P57682 345 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 PIN1Q13526 163 aaPredicted RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 MOGQ16653 247 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 ALKBH6Q3KRA9 238 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 TMEM154Q6P9G4 183 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 LRRC18Q8N456 261 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 NOXO1Q8NFA2 376 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 OR8J3Q8NGG0 315 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 PFN4Q8NHR9 129 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 TMEM255BQ8WV15 326 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 TMEM239Q8WW34 195 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 TMEM186Q96B77 213 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 OR51B6Q9H340 312 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 NARFLQ9H6Q4 476 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 VIPAS39Q9H9C1 493 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 SIAEQ9HAT2 523 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 NKIRAS2Q9NYR9 191 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 TREM2Q9NZC2 230 aa13.59□□□□□ -0.23
TUBB3-213ENST00000557262 STX18Q9P2W9 335 aaKnown RBP13.59□□□□□ -0.23
TUBB3-213ENST00000557262 FAM157AC9JC47 383 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 WNT9BO14905 357 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 RP2O75695 350 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 MMP7P09237 267 aaPredicted RBP13.58□□□□□ -0.24
TUBB3-213ENST00000557262 TSPAN19P0C672 248 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 GAAP10253 952 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 TNFRSF1BP20333 461 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 APLNRP35414 380 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 ERVS71-1P61550 626 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 LMO4P61968 165 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 MRPS34P82930 218 aaKnown RBP13.58□□□□□ -0.24
TUBB3-213ENST00000557262 LAPTM4AQ15012 233 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 PCGF3Q3KNV8 242 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 MMEL1Q495T6 779 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 C10orf128Q5T292 105 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 ARMC4Q5T2S8 1044 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 DEF8Q6ZN54 512 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 ZNF583Q96ND8 569 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 TSPAN32Q96QS1 320 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 TMEM120AQ9BXJ8 343 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 C20orf141Q9NUB4 165 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 MRGBPQ9NV56 204 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 HIF1ANQ9NWT6 349 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 MED31Q9Y3C7 131 aa13.58□□□□□ -0.24
TUBB3-213ENST00000557262 SHOX2O60902 331 aaPredicted RBP13.57□□□□□ -0.24
TUBB3-213ENST00000557262 MSMBP08118 114 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms