RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 PYROXD1Q8WU10 500 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 MS4A14Q96JA4 679 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 B9D2Q9BPU9 175 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 DESI2Q9BSY9 194 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 ACPTQ9BZG2 426 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 OR11A1Q9GZK7 315 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 NMUR2Q9GZQ4 415 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 PATZ1Q9HBE1 687 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM165Q9HC07 324 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 MIEF1Q9NQG6 463 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 SIRT3Q9NTG7 399 aaPredicted RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 CPSF2Q9P2I0 782 aaKnown RBP3.92□□□□□ -1.78
SCFD1-223ENST00000557076 PRDM4Q9UKN5 801 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 FZR1Q9UM11 496 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 PCDHGB4Q9UN71 923 aa3.92□□□□□ -1.78
SCFD1-223ENST00000557076 IGHV3OR16-10A0A075B7F0 116 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 KIR2DS1A0A191URI9 304 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 MDFIC2A0A1B0GVS7 189 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 A0A1W2PPW3 197 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TCRBV9S1A1TA0A576 114 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 AQP7P3A6NL99 342 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 H0YL77 283 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TNFRSF13BO14836 293 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TRIAP1O43715 76 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 GPR137BO60478 399 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TBX19O60806 448 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SKAP2O75563 359 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TUSC2O75896 110 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CLPTM1O96005 669 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CSTAP01040 98 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 MT-ND5P03915 603 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 HMGN2P05204 90 aaKnown RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CD1AP06126 327 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 GPIP06744 558 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SFTPBP07988 381 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 MELTFP08582 738 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SBK2P0C263 348 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SBK3P0C264 359 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SSTR1P30872 391 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 IER3P46695 156 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 P2RY4P51582 365 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CCR4P51679 360 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CDH13P55290 713 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 KLF3P57682 345 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 BTKQ06187 659 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 HSPB3Q12988 150 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 FASTKD3Q14CZ7 662 aaKnown RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 RASA2Q15283 850 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM155Q4W5P6 130 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 PDZK1Q5T2W1 519 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CASC10Q5T4H9 136 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CLEC6AQ6EIG7 209 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 RGS7BPQ6MZT1 257 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 BTNL3Q6UXE8 466 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 FRRS1Q6ZNA5 592 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 Q6ZSV7 163 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 Q6ZTK2 550 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SPICQ8N5J4 248 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TMCO5AQ8N6Q1 288 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TMEM99Q8N816 258 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 NOA1Q8NC60 698 aaKnown RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SYNPRQ8TBG9 265 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 METTL6Q8TCB7 284 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 ACTRT1Q8TDG2 376 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 DCAKDQ8WVC6 231 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 OIT3Q8WWZ8 545 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 RAB40AQ8WXH6 277 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 C11orf40Q8WZ69 217 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CDS1Q92903 461 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 RFKQ969G6 155 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 PHF21AQ96BD5 680 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 DDIT4LQ96D03 193 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 ELMOD3Q96FG2 381 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 METTL2AQ96IZ6 378 aaKnown RBP3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CLPTM1LQ96KA5 538 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 OSBPL9Q96SU4 736 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SDF2Q99470 211 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 ACTRT3Q9BYD9 372 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 MARCH7Q9H992 704 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SAP30LQ9HAJ7 183 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 GPR35Q9HC97 309 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TNFRSF19Q9NS68 423 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 UBAP1Q9NZ09 502 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 SLC7A8Q9UHI5 535 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 FBXL3Q9UKT7 428 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 NPTNQ9Y639 398 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 CACNG2Q9Y698 323 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 LYSTQ99698 3801 aa3.91□□□□□ -1.78
SCFD1-223ENST00000557076 TMED7-TICAM2A0A0A6YYA0 188 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF816-ZNF321PA0A0X1KG74 233 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 LCE6AA0A183 80 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 ISPDA4D126 451 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 LIPT2A6NK58 231 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 ZNF99A8MXY4 864 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-223ENST00000557076 F5H0A9 414 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-223ENST00000557076 POC1B-GALNT4F8VUJ3 575 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 SMIM24O75264 130 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 JTBO76095 146 aa3.9□□□□□ -1.79
SCFD1-223ENST00000557076 OR4F21O95013 312 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms