RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 TRAF4Q9BUZ4 470 aaPredicted RBP19.87■□□□□ 0.77
TDP1-216ENST00000556867 TRIM15Q9C019 465 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 TMCC3Q9ULS5 477 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 SLC2A10O95528 541 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 CD8AP01732 235 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 TTKP33981 857 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 HMGA2P52926 109 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 ERVK-25P63136 954 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 CHRNB3Q05901 458 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 NPRL3Q12980 569 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 BNIP1Q12981 228 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 FAM98BQ52LJ0 330 aaKnown RBP19.86■□□□□ 0.77
TDP1-216ENST00000556867 AGAP6Q5VW22 663 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 FAM122BQ7Z309 247 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 ZER1Q7Z7L7 766 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 SKA3Q8IX90 412 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 ZNF75AQ96N20 296 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 ADAM18Q9Y3Q7 739 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 LYVE1Q9Y5Y7 322 aa19.86■□□□□ 0.77
TDP1-216ENST00000556867 FLNAP21333 2647 aaKnown RBP19.85■□□□□ 0.77
TDP1-216ENST00000556867 ARHGEF9O43307 516 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 OR10H3O60404 316 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 FARS2O95363 451 aaKnown RBP19.85■□□□□ 0.77
TDP1-216ENST00000556867 FPR3P25089 353 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 CALCRP30988 508 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 IFNGR2P38484 337 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 FXYD6P3P58550 94 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 MRPS34P82930 218 aaKnown RBP19.85■□□□□ 0.77
TDP1-216ENST00000556867 FMODQ06828 376 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 Q5PR19 223 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 THEM4Q5T1C6 240 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 SLC25A47Q6Q0C1 308 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 DPPA2Q7Z7J5 298 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 IL17RDQ8NFM7 739 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 NRIP3Q9NQ35 241 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 GRHPRQ9UBQ7 328 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 FBXL3Q9UKT7 428 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 UGT2A1Q9Y4X1 527 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 VPS13CQ709C8 3753 aa19.85■□□□□ 0.77
TDP1-216ENST00000556867 IGKV1D-43A0A0B4J1Z2 117 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 IGHV2OR16-5A0A0B4J2B6 119 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 AQP12BA6NM10 295 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 MGRN1O60291 552 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 DNAJC8O75937 253 aaPredicted RBP19.84■□□□□ 0.77
TDP1-216ENST00000556867 RAB36O95755 333 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 ZNF14P17017 642 aaPredicted RBP19.84■□□□□ 0.77
TDP1-216ENST00000556867 FABP6P51161 128 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 RAB1AP62820 205 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 PIGFQ07326 219 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 GPR139Q6DWJ6 353 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 C11orf71Q6IPW1 123 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 PRSS57Q6UWY2 283 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 THSD4Q6ZMP0 1018 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 AQP12AQ8IXF9 295 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 FBXL14Q8N1E6 418 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 MUC15Q8N387 334 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 CLDN22Q8N7P3 220 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 WFDC11Q8NEX6 87 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 OR4F15Q8NGB8 312 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 OR4C15Q8NGM1 316 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 FGFBP3Q8TAT2 258 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 GTPBP3Q969Y2 492 aaKnown RBP19.84■□□□□ 0.77
TDP1-216ENST00000556867 Q96M85 177 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 ZNF570Q96NI8 536 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 RBP7Q96R05 134 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 SH3GL3Q99963 347 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 CBLN4Q9NTU7 201 aa19.84■□□□□ 0.77
TDP1-216ENST00000556867 ZNF469Q96JG9 3925 aaPredicted RBP19.83■□□□□ 0.77
TDP1-216ENST00000556867 TNFRSF11BO00300 401 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 RAP2AP10114 183 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 APOBEC3AP31941 199 aaPredicted RBP19.83■□□□□ 0.77
TDP1-216ENST00000556867 GIPRP48546 466 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 GSSP48637 474 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 PTDSS1P48651 473 aaKnown RBP19.83■□□□□ 0.77
TDP1-216ENST00000556867 MESTQ5EB52 335 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 C1orf94Q6P1W5 598 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 SMARCD3Q6STE5 483 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 DPY19L2P2Q6ZN68 376 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 ADGRG5Q8IZF4 528 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 FANK1Q8TC84 345 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 NSMAFQ92636 917 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 HTRA1Q92743 480 aa19.83■□□□□ 0.77
TDP1-216ENST00000556867 ACANP16112 2415 aa19.83■□□□□ 0.76
TDP1-216ENST00000556867 XKRYO14609 159 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 AHCYL1O43865 530 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 PATE4P0C8F1 98 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 NPR2P20594 1047 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 SDHAP31040 664 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 ATP5J2P56134 94 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 HGFACQ04756 655 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 KRR1Q13601 381 aaKnown RBP19.82■□□□□ 0.76
TDP1-216ENST00000556867 OR2T5Q6IEZ7 315 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 PGBD2Q6P3X8 592 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 LINC00471Q8N535 108 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 NUP37Q8NFH4 326 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 OR2T29Q8NH02 315 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 GNPDA2Q8TDQ7 276 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 NABP1Q96AH0 204 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 MS4A3Q96HJ5 214 aa19.82■□□□□ 0.76
TDP1-216ENST00000556867 TMUB1Q9BVT8 246 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms