RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 CRLF1O75462 422 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 TRMUO75648 421 aaKnown RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 CIB2O75838 187 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 CCNB2O95067 398 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 CD14P08571 375 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 NR2C1P13056 603 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 PAX1P15863 534 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 PAX7P23759 505 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 PTAFRP25105 342 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 PTH2RP49190 550 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 ZNF133P52736 654 aaPredicted RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 PPP1R8Q12972 351 aaKnown RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 TSPAN31Q12999 210 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 MICAQ29983 383 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 ANKRD16Q6P6B7 361 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 TMEM108Q6UXF1 575 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 WDR31Q8NA23 367 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 KBTBD8Q8NFY9 601 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 ZNF519Q8TB69 540 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 BCL2L2Q92843 193 aaPredicted RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 ZNF837Q96EG3 531 aaPredicted RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 PERPQ96FX8 193 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 DUS3LQ96G46 650 aaKnown RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 NELFAQ9H3P2 528 aa14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 ZNF346Q9UL40 294 aaKnown RBP14.04□□□□□ -0.16
CCDC85C-204ENST00000555822 ARPC4-TTLL3A0A0A6YYG9 625 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 A0A1W2PR80 420 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ARRDC5A6NEK1 342 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 A6NIZ1 184 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ABCD4O14678 606 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 WNT11O96014 354 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 CDH2P19022 906 aaPredicted RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 RPL4P36578 427 aaKnown RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ZNF83P51522 516 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 CLRN1P58418 232 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 FXYD6P3P58550 94 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 RAP1BP61224 184 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 RAP1AP62834 184 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ARF1P84077 181 aaKnown RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 PPP2R2BQ00005 443 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 RUNX1T1Q06455 604 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 TBRG1Q3YBR2 411 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 SMARCD3Q6STE5 483 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 KLHL24Q6TFL4 600 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 FAM122BQ7Z309 247 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 IGFN1Q86VF2 1251 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ARIH2OSQ8N7S6 290 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 OR9Q2Q8NGE9 314 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 FNDC8Q8TC99 324 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 SMAP2Q8WU79 429 aaPredicted RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 NEUROG1Q92886 237 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 TSPAN32Q96QS1 320 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 KCNK17Q96T54 332 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ALG12Q9BV10 488 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 KATNB1Q9BVA0 655 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 NRIP3Q9NQ35 241 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 ZNF701Q9NV72 531 aaPredicted RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 CISD1Q9NZ45 108 aaKnown RBP14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 DNAJB9Q9UBS3 223 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 U3KQV3 271 aa14.03□□□□□ -0.16
CCDC85C-204ENST00000555822 SHISA9B4DS77 424 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 M0R1B8 84 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 GNGT2O14610 69 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 DANCRP0C864 163 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 APEHP13798 732 aaKnown RBP14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 CD40P25942 277 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 ACVR1BP36896 505 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 CDH11P55287 796 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 TOP3AQ13472 1001 aaPredicted RBP14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 CCNIQ14094 377 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 RFX4Q33E94 735 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 HIKESHIQ53FT3 197 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 GPR139Q6DWJ6 353 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 RPL13AP3Q6NVV1 102 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 LRFN4Q6PJG9 635 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 THSD4Q6ZMP0 1018 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 DPY19L2P2Q6ZN68 376 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 ZNF620Q6ZNG0 422 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 CCDC36Q8IYA8 594 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 FANK1Q8TC84 345 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 MCHR2Q969V1 340 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 NMD3Q96D46 503 aaKnown RBP14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 FOXB1Q99853 325 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 BDH2Q9BUT1 245 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 DGCR6LQ9BY27 220 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 OR52D1Q9H346 318 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 SMURF2Q9HAU4 748 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 MOV10Q9HCE1 1003 aaKnown RBP14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 ARMC1Q9NVT9 282 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 GRHPRQ9UBQ7 328 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 POFUT2Q9Y2G5 429 aa14.02□□□□□ -0.17
CCDC85C-204ENST00000555822 DHHO43323 396 aa14.01□□□□□ -0.17
CCDC85C-204ENST00000555822 AHCYL1O43865 530 aa14.01□□□□□ -0.17
CCDC85C-204ENST00000555822 DEAF1O75398 565 aaPredicted RBP14.01□□□□□ -0.17
CCDC85C-204ENST00000555822 SEC14L2O76054 403 aa14.01□□□□□ -0.17
CCDC85C-204ENST00000555822 TXNDC12O95881 172 aa14.01□□□□□ -0.17
CCDC85C-204ENST00000555822 GASTP01350 101 aa14.01□□□□□ -0.17
CCDC85C-204ENST00000555822 QDPRP09417 244 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms