RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 BTBD17A6NE02 478 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 DNASE2O00115 360 aaPredicted RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 ARPC3O15145 178 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 RAMP3O60896 148 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 PEX11AO75192 247 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 IDH1O75874 414 aaKnown RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 IL4P05112 153 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CAPN1P07384 714 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 OR56A5P0C7T3 313 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ARL14EPLP0DKL9 152 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 IGHV1-8P0DP01 117 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CALM1P0DP23 149 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CALM2P0DP24 149 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CALM3P0DP25 149 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 TCN1P20061 433 aaPredicted RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 IL12AP29459 219 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CEACAM6P40199 344 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CDKN2BP42772 138 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 MAGEA8P43361 318 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CCNG1P51959 295 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 SUB1P53999 127 aaKnown RBP eCLIP0.83□□□□□ -2.28
SRP54-207ENST00000555535 CRISP1P54107 249 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CDK16Q00536 496 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 KLRB1Q12918 225 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ERCC8Q13216 396 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 PRPSAP1Q14558 356 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 PTPN20Q4JDL3 420 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CCDC92Q53HC0 331 aaPredicted RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 PMF1Q6P1K2 205 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 PRMT9Q6P2P2 845 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 TRIM40Q6P9F5 258 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ZNF493Q6ZR52 646 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 NUDCD3Q8IVD9 361 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 PIANPQ8IYJ0 282 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ZNF683Q8IZ20 524 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 MFSD9Q8NBP5 474 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 OR10G4Q8NGN3 311 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 OR1P1Q8NH06 330 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 SCFD1Q8WVM8 642 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 C10orf35Q96D05 121 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 TBC1D31Q96DN5 1066 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 SENP8Q96LD8 212 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 HSFY1Q96LI6 401 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 RPRD1AQ96P16 312 aaPredicted RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 OR8B4Q96RC9 309 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ZNF382Q96SR6 550 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 COPS8Q99627 209 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 TMEM59Q9BXS4 323 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ZNF717Q9BY31 904 aaPredicted RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 RIBC2Q9H4K1 309 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 RPF2Q9H7B2 306 aaKnown RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 LY9Q9HBG7 655 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 MRPL47Q9HD33 250 aaKnown RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 KCNJ16Q9NPI9 418 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 FBXO6Q9NRD1 293 aaPredicted RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 UFSP2Q9NUQ7 469 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 GPATCH2LQ9NWQ4 482 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 HPF1Q9NWY4 346 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 XCL2Q9UBD3 114 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CD84Q9UIB8 345 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ISY1Q9ULR0 285 aaKnown RBP0.83□□□□□ -2.28
SRP54-207ENST00000555535 SEC16AO15027 2179 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 CACNA1DQ01668 2161 aa0.83□□□□□ -2.28
SRP54-207ENST00000555535 ATP10AO60312 1499 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 RAD51BO15315 384 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ZNF208O43345 1280 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SLC25A14O95258 325 aaPredicted RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 GUCA1CO95843 209 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 GLAP06280 429 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 HEXBP07686 556 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 GNAO1P09471 354 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CMA1P23946 247 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 MAS1LP35410 378 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 GPR6P46095 362 aaPredicted RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 CSNK1A1P48729 337 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CX3CR1P49238 355 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SLC11A1P49279 550 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 PPT1P50897 306 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CCR8P51685 355 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CDH4P55283 916 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ERVK-25P63136 954 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ACTG2P63267 376 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ECH1Q13011 328 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 IFT88Q13099 833 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 MAB21L1Q13394 359 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 PIGHQ14442 188 aaPredicted RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 GANABQ14697 944 aaKnown RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 PON3Q15166 354 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CDC37Q16543 378 aaPredicted RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 POU2AF1Q16633 256 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 KLHL38Q2WGJ6 581 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CCDC152Q4G0S7 254 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 FAM78AQ5JUQ0 283 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 RIPPLY2Q5TAB7 128 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SAXO2Q658L1 398 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SLC25A24Q6NUK1 477 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ENPP6Q6UWR7 440 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ASCL5Q7RTU5 278 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 OAFQ86UD1 273 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 PRSS58Q8IYP2 241 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms