RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CRABP1P29762 137 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 CCKARP32238 428 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 SLC25A1P53007 311 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 ARF1P84077 181 aaKnown RBP11.13□□□□□ -0.63
SYNE2-219ENST00000555323 FMODQ06828 376 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 CD47Q08722 323 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 C12orf73Q69YU5 71 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 LEG1Q6P5S2 330 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 BHLHA15Q7RTS1 189 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-219ENST00000555323 SSX8Q7RTT4 187 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 JAZF1Q86VZ6 243 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 OR6V1Q8N148 313 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 OR1K1Q8NGR3 316 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 PTP4A1Q93096 173 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 FOXB1Q99853 325 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 NELFAQ9H3P2 528 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 FN3KQ9H479 309 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 TMEM38BQ9NVV0 291 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 SMPD3Q9NY59 655 aaPredicted RBP11.13□□□□□ -0.63
SYNE2-219ENST00000555323 B9D1Q9UPM9 204 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 UGT2A1Q9Y4X1 527 aa11.13□□□□□ -0.63
SYNE2-219ENST00000555323 SPTBN1Q01082 2364 aaKnown RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 RIIAD1A6NNX1 92 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 H0YJX3 145 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 H7C1C5 153 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 DCTN6O00399 190 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 SLC16A7O60669 478 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 KHDRBS3O75525 346 aaKnown RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 SNAP29O95721 258 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 ZNF3P17036 446 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 NPR2P20594 1047 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 PAX7P23759 505 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 ZNF84P51523 738 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 LCN6P62502 163 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 MRPS34P82930 218 aaKnown RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 CRMP1Q14194 572 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 ETFDHQ16134 617 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 C22orf34Q6ZV56 151 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 DMRTC2Q8IXT2 367 aaPredicted RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 CCDC36Q8IYA8 594 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 GALNT4Q8N4A0 578 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 SDR9C7Q8NEX9 313 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 HSD17B8Q92506 261 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 SLC38A2Q96QD8 506 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 MBOAT4Q96T53 435 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 SPOCK3Q9BQ16 436 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 PRRG3Q9BZD7 231 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 RACGAP1Q9H0H5 632 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 TOR3AQ9H497 397 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 OBP2BQ9NPH6 170 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 FAM118AQ9NWS6 357 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 TVP23BQ9NYZ1 205 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 NDRG3Q9UGV2 375 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 NDRG4Q9ULP0 352 aaKnown RBP11.12□□□□□ -0.63
SYNE2-219ENST00000555323 HCFC1P51610 2035 aa11.12□□□□□ -0.63
SYNE2-219ENST00000555323 ARPC4-TTLL3A0A0A6YYG9 625 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 IGLV1-36A0A0B4J1U3 117 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 LOC100130705A0A1B0GUX0 176 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 OR5H1A6NKK0 313 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 RAD51DO75771 328 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 OR8G3PP0DMU2 310 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 IL32P24001 234 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 TSC22D1Q15714 1073 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SNAPC1Q16533 368 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 KCNMB1Q16558 191 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 ZIK1Q3SY52 487 aaPredicted RBP11.11□□□□□ -0.63
SYNE2-219ENST00000555323 TBRG1Q3YBR2 411 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 FAM27BQ5VT28 67 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 C9orf135Q5VTT2 229 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 DNM1P34Q6PK57 102 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SLC22A24Q8N4F4 322 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 WDR31Q8NA23 367 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 CYB561A3Q8NBI2 242 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 OR2T4Q8NH00 348 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 S100PBPQ96BU1 408 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 DACH2Q96NX9 599 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 WFIKKN1Q96NZ8 548 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 TSSK2Q96PF2 358 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 PITX2Q99697 317 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 WACQ9BTA9 647 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 ACTR6Q9GZN1 396 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SIAEQ9HAT2 523 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SLC24A3Q9HC58 644 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SRA1Q9HD15 236 aaKnown RBP11.11□□□□□ -0.63
SYNE2-219ENST00000555323 RPRD1BQ9NQG5 326 aaKnown RBP11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SLC17A5Q9NRA2 495 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 SLC25A15Q9Y619 301 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 CACNA1CQ13936 2221 aa11.11□□□□□ -0.63
SYNE2-219ENST00000555323 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
SYNE2-219ENST00000555323 FLNCQ14315 2725 aa11.1□□□□□ -0.63
SYNE2-219ENST00000555323 PRSS44E7EML9 344 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms