RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 GTF3C1Q12789 2109 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 MADDQ8WXG6 1647 aa3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 DHX57Q6P158 1386 aaKnown RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZC3H13Q5T200 1668 aaKnown RBP3.62□□□□□ -1.83
CKS1BP1-201ENST00000555221 NPHP4O75161 1426 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZFYVE9O95405 1425 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 MED14O60244 1454 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 SCAF11Q99590 1463 aaKnown RBP3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 PRDM15P57071 1507 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 H3BNH8 94 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 PEX7O00628 323 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 CCNCP24863 283 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 PRMT2P55345 433 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 ENPEPQ07075 957 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 XKR7Q5GH72 579 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 C19orf35Q6ZS72 473 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 B3GNT7Q8NFL0 401 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 DTX3LQ8TDB6 740 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 SDR42E1Q8WUS8 393 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 FAM210BQ96KR6 192 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 RARRES2Q99969 163 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 CENPKQ9BS16 269 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 GPR61Q9BZJ8 451 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 SLC25A37Q9NYZ2 338 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 LTBP4Q8N2S1 1624 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 RNF17Q9BXT8 1623 aaKnown RBP3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 MSH6P52701 1360 aa3.61□□□□□ -1.83
CKS1BP1-201ENST00000555221 IQSEC2Q5JU85 1478 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 RIMS1Q86UR5 1692 aaKnown RBP3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 A0A0B4J2A0 478 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 A6NDX4 124 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 ERVV-1B6SEH8 477 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 XKRYO14609 159 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 MDKP21741 143 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 TNNT2P45379 298 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 ACLYP53396 1101 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 FZD2Q14332 565 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 RAET1LQ5VY80 246 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 LCN12Q6JVE5 192 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 METAP1DQ6UB28 335 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 C6orf120Q7Z4R8 191 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF429Q86V71 674 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 THOC6Q86W42 341 aaKnown RBP3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 Q8N9W7 124 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 OR51G1Q8NGK1 321 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 SLC22A8Q8TCC7 542 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 SGK3Q96BR1 496 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 SH3GL3Q99963 347 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 OSBPL10Q9BXB5 764 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 INPP5EQ9NRR6 644 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 SHPKQ9UHJ6 478 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 TRAPPC4Q9Y296 219 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 TP53TG5Q9Y2B4 290 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 HEBP2Q9Y5Z4 205 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 RIMS2Q9UQ26 1411 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 RLFQ13129 1914 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 MEGF6O75095 1541 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 EFCAB6Q5THR3 1501 aa3.6□□□□□ -1.83
CKS1BP1-201ENST00000555221 VWDEQ8N2E2 1590 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 PREX1Q8TCU6 1659 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 SMCO3A2RU48 225 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 RNF13O43567 381 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ERLIN1O75477 346 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 CA11O75493 328 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 EIF3GO75821 320 aaKnown RBP eCLIP3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 AGTP01019 485 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 CT62P0C5K7 136 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 IGHV3-43DP0DP04 118 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF43P17038 809 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 CCR8P51685 355 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 GPX6P59796 221 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF92Q03936 586 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 AQP6Q13520 282 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 SGCAQ16586 387 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF658BQ4V348 819 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 CYB5R2Q6BCY4 276 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF621Q6ZSS3 439 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 RHEBL1Q8TAI7 183 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 MED8Q96G25 268 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF799Q96GE5 643 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 CTPS2Q9NRF8 586 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 ZNF226Q9NYT6 803 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 PCYOX1Q9UHG3 505 aa3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 LRPPRCP42704 1394 aaKnown RBP3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 EIF3AQ14152 1382 aaKnown RBP3.59□□□□□ -1.83
CKS1BP1-201ENST00000555221 SLIT1O75093 1534 aa3.59□□□□□ -1.84
CKS1BP1-201ENST00000555221 CPS1P31327 1500 aa3.59□□□□□ -1.84
CKS1BP1-201ENST00000555221 CEP170BQ9Y4F5 1589 aaPredicted RBP3.59□□□□□ -1.84
CKS1BP1-201ENST00000555221 CAMSAP1Q5T5Y3 1602 aa3.59□□□□□ -1.84
CKS1BP1-201ENST00000555221 TET3O43151 1660 aa3.59□□□□□ -1.84
CKS1BP1-201ENST00000555221 CLTCQ00610 1675 aaKnown RBP3.59□□□□□ -1.84
CKS1BP1-201ENST00000555221 C9JVG2 144 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 LAD1O00515 517 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 SMIM10L1P0DMW3 83 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZNF24P17028 368 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 BEX3Q00994 111 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 SMARCB1Q12824 385 aa3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 SRSF5Q13243 272 aaKnown RBP3.58□□□□□ -1.84
CKS1BP1-201ENST00000555221 ZBED5Q49AG3 693 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms