RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SLC22A10Q63ZE4 541 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 SFXN4Q6P4A7 337 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 BAIAP2L2Q6UXY1 529 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 SULF2Q8IWU5 870 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 FAM98AQ8NCA5 519 aaKnown RBP15.61■□□□□ 0.09
SHOX-204ENST00000554971 FAM71CQ8NEG0 241 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 TAAR6Q96RI8 345 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 GALNT9Q9HCQ5 603 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 NRIP3Q9NQ35 241 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 EXTL2Q9UBQ6 330 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 SLC6A5Q9Y345 797 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 GTF3C1Q12789 2109 aa15.61■□□□□ 0.09
SHOX-204ENST00000554971 LINC00854A0A1B0GVQ3 168 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 FAM240BA0A1B0GVZ2 78 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 TFECO14948 347 aaPredicted RBP15.6■□□□□ 0.09
SHOX-204ENST00000554971 ORC5O43913 435 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 FADS1O60427 444 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 CD46P15529 392 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 SHC1P29353 583 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 THBS2P35442 1172 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 PITPNBP48739 271 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 CLDN20P56880 219 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 OR12D2P58182 307 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 PMP22Q01453 160 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 P2RY14Q15391 338 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 TBRG1Q3YBR2 411 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 PYHIN1Q6K0P9 492 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 SMIM19Q96E16 107 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 UBQLN4Q9NRR5 601 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 ST6GALNAC2Q9UJ37 374 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 MRTO4Q9UKD2 239 aaKnown RBP15.6■□□□□ 0.09
SHOX-204ENST00000554971 E9PI62 339 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 TP53I11O14683 189 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 IMPA2O14732 288 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 HIST1H1CP16403 213 aaKnown RBP15.6■□□□□ 0.09
SHOX-204ENST00000554971 S100A1P23297 94 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 PYCR1P32322 319 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 EVI2BP34910 448 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 NR4A2P43354 598 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 DNASE1L1P49184 302 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 RAB25P57735 213 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 BTG1P62324 171 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 RPS4XP62701 263 aaKnown RBP15.6■□□□□ 0.09
SHOX-204ENST00000554971 SIRPAP78324 504 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 FOXO1Q12778 655 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 INSL4Q14641 139 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 FNDC7Q5VTL7 733 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 WBP2NLQ6ICG8 309 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 TMEM81Q6P7N7 255 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 LIX1LQ8IVB5 337 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 CYB561A3Q8NBI2 242 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 GHSRQ92847 366 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 CREB3L1Q96BA8 519 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 C5orf34Q96MH7 638 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 DDOQ99489 341 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 NMNAT2Q9BZQ4 307 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 NDEL1Q9GZM8 345 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 C12orf10Q9HB07 376 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 DDX28Q9NUL7 540 aaKnown RBP15.6■□□□□ 0.09
SHOX-204ENST00000554971 IER3IP1Q9Y5U9 82 aa15.6■□□□□ 0.09
SHOX-204ENST00000554971 C1QL1O75973 258 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 UTS2O95399 124 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 RAB3BP20337 219 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 SLC3A1Q07837 685 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 MRPL28Q13084 256 aaKnown RBP15.59■□□□□ 0.09
SHOX-204ENST00000554971 EFR3AQ14156 821 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 KCTD20Q7Z5Y7 419 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.59■□□□□ 0.09
SHOX-204ENST00000554971 NR2C2APQ86WQ0 139 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 TCTE3Q8IZS6 198 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 C3orf49Q96BT1 292 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 B3GAT2Q9NPZ5 323 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 RPRD1BQ9NQG5 326 aaKnown RBP15.59■□□□□ 0.09
SHOX-204ENST00000554971 MOKQ9UQ07 419 aa15.59■□□□□ 0.09
SHOX-204ENST00000554971 A0A0G2JK05 382 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 C2orf72A6NCS6 295 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 NOTOA8MTQ0 251 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 YES1P07947 543 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 MRPL3P09001 348 aaKnown RBP15.58■□□□□ 0.09
SHOX-204ENST00000554971 RPL4P36578 427 aaKnown RBP15.58■□□□□ 0.09
SHOX-204ENST00000554971 RFC3P40938 356 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 SLC25A1P53007 311 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 PITPNAQ00169 270 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 CDK5R1Q15078 307 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 PRR30Q53SZ7 412 aaPredicted RBP15.58■□□□□ 0.09
SHOX-204ENST00000554971 RNFT1Q5M7Z0 435 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 TMEM53Q6P2H8 277 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 SLC35F2Q8IXU6 374 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 TMEM178AQ8NBL3 297 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 NPEPL1Q8NDH3 523 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 OR2M7Q8NG81 312 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 OR4K13Q8NH42 304 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 CAPSLQ8WWF8 208 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 ANGPTL4Q9BY76 406 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 TP63Q9H3D4 680 aaPredicted RBP15.58■□□□□ 0.09
SHOX-204ENST00000554971 RASD1Q9Y272 281 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 KLF13Q9Y2Y9 288 aaPredicted RBP15.58■□□□□ 0.09
SHOX-204ENST00000554971 UBR5O95071 2799 aaPredicted RBP15.58■□□□□ 0.09
SHOX-204ENST00000554971 HIVEP3Q5T1R4 2406 aa15.58■□□□□ 0.09
SHOX-204ENST00000554971 WISP2O76076 250 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms