RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SVOPQ8N4V2 548 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 OR6K3Q8NGY3 331 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 KISS1RQ969F8 398 aaPredicted RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 NMD3Q96D46 503 aaKnown RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 LGALS12Q96DT0 336 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 ZMYND19Q96E35 227 aaPredicted RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 TMEM80Q96HE8 168 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 TSSK2Q96PF2 358 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 MNTQ99583 582 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 VCX3AQ9NNX9 186 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 FGF20Q9NP95 211 aaPredicted RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 INPP5EQ9NRR6 644 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 CHCHD3Q9NX63 227 aaKnown RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 UPB1Q9UBR1 384 aa12.72□□□□□ -0.37
SHOX2-206ENST00000554685 DIMT1Q9UNQ2 313 aaKnown RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 EXOGQ9Y2C4 368 aaKnown RBP12.72□□□□□ -0.37
SHOX2-206ENST00000554685 LAMA5O15230 3695 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 DCTN6O00399 190 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 DHHO43323 396 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 HRGP04196 525 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 CDK1P06493 297 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 SBK2P0C263 348 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 TMIGD3P0DMS9 266 aaPredicted RBP12.71□□□□□ -0.37
SHOX2-206ENST00000554685 MYL12AP19105 171 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 HSF2Q03933 536 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 FMODQ06828 376 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 ST3GAL4Q11206 333 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 GUSBP1Q15486 140 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 LINC01590Q5TEZ4 76 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 RTL6Q6ICC9 239 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 TMEM211Q6ICI0 200 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 PLXDC2Q6UX71 529 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 DOLPP1Q86YN1 238 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 OR10H5Q8NGA6 315 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 NSMAFQ92636 917 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
SHOX2-206ENST00000554685 INTS14Q96SY0 518 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 CCDC90BQ9GZT6 254 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 MARCH7Q9H992 704 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 SCOCQ9UIL1 159 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 KCNG2Q9UJ96 466 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 COA3Q9Y2R0 106 aaPredicted RBP12.71□□□□□ -0.37
SHOX2-206ENST00000554685 EXOSC1Q9Y3B2 195 aaKnown RBP12.71□□□□□ -0.37
SHOX2-206ENST00000554685 FAM215AQ9Y5M1 114 aa12.71□□□□□ -0.37
SHOX2-206ENST00000554685 PKD1L2Q7Z442 2459 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 DSPP15924 2871 aaKnown RBP12.7□□□□□ -0.38
SHOX2-206ENST00000554685 ATMQ13315 3056 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF587BE7ETH6 402 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 TMCC2O75069 709 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF823P16415 610 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 LAP3P28838 519 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 OR3A2P47893 321 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 TUBA4AP68366 448 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 RNLSQ5VYX0 342 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 SHFQ7M4L6 423 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 SLC16A9Q7RTY1 509 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
SHOX2-206ENST00000554685 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 OR52I1Q8NGK6 324 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 TTYH2Q9BSA4 534 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 SFXN3Q9BWM7 321 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 MRPS26Q9BYN8 205 aaKnown RBP12.7□□□□□ -0.38
SHOX2-206ENST00000554685 YIPF3Q9GZM5 350 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 ADGRL4Q9HBW9 690 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 TMEM14AQ9Y6G1 99 aa12.7□□□□□ -0.38
SHOX2-206ENST00000554685 A0A1W2PPL8 197 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 HSPB2A8KAH6 182 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 FAM171A2A8MVW0 826 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 RPL36A-HNRNPH2H7BZ11 118 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 PHYHO14832 338 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 UPK3AO75631 287 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 STSP08842 583 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 OR2T7P0C7T2 308 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 NPR2P20594 1047 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 CEACAM8P31997 349 aaPredicted RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 NTF4P34130 210 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 SH3BGRP55822 239 aaPredicted RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 SIRPAP78324 504 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ROR2Q01974 943 aaKnown RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 MVKQ03426 396 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 HSPB2Q16082 182 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ETFDHQ16134 617 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 NRN1LQ496H8 165 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 TSPO2Q5TGU0 170 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 FBXW9Q5XUX1 488 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 FOXL2NBQ6ZUU3 175 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ERI1Q8IV48 349 aaKnown RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 GCNT2Q8N0V5 402 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 UBE2J2Q8N2K1 259 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ACBD7Q8N6N7 88 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms