RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 IFI44LQ53G44 452 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 ALG10Q5BKT4 473 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 C6orf52Q5T4I8 152 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 OFCC1Q8IZS5 231 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 CPEB3Q8NE35 698 aaKnown RBP15.68■□□□□ 0.1
SHMT2-206ENST00000553529 FAM162AQ96A26 154 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 NABP1Q96AH0 204 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 KCTD14Q9BQ13 255 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-206ENST00000553529 BPESC1Q9GZL8 116 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 EFCAB1Q9HAE3 211 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 HIF3AQ9Y2N7 669 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 ADAM18Q9Y3Q7 739 aa15.68■□□□□ 0.1
SHMT2-206ENST00000553529 SONP18583 2426 aaKnown RBP15.67■□□□□ 0.1
SHMT2-206ENST00000553529 UBL3O95164 117 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 IFNW1P05000 195 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 OR8G3PP0DMU2 310 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 PPOXP50336 477 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 CTXN1P60606 82 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 LOXL1Q08397 574 aaPredicted RBP15.67■□□□□ 0.1
SHMT2-206ENST00000553529 ST3GAL3Q11203 375 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 TRIP10Q15642 601 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 FXNQ16595 210 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 C1QTNF12Q5T7M4 302 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 FKBP9P1Q75LS8 142 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 PIWIL3Q7Z3Z3 882 aaKnown RBP15.67■□□□□ 0.1
SHMT2-206ENST00000553529 LIPHQ8WWY8 451 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 MRPL24Q96A35 216 aaKnown RBP15.67■□□□□ 0.1
SHMT2-206ENST00000553529 FNDC11Q9BVV2 318 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 ARL8BQ9NVJ2 186 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 IL20RAQ9UHF4 553 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 HIVEP2P31629 2446 aa15.67■□□□□ 0.1
SHMT2-206ENST00000553529 MGRN1O60291 552 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 NCR1O76036 304 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 PDE5AO76074 875 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 TP53P04637 393 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 MMP7P09237 267 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 SAGP10523 405 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 NAT2P11245 290 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 APEX1P27695 318 aaKnown RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 NR4A2P43354 598 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 PDLIM4P50479 330 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 ERVK-25P63136 954 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 GNGT1P63211 74 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 GLO1Q04760 184 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 CD47Q08722 323 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 SEC23BQ15437 767 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 SLC25A47Q6Q0C1 308 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 HACD2Q6Y1H2 254 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 SLC16A14Q7RTX9 510 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 ARPINQ7Z6K5 226 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 AKR7LQ8NHP1 331 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 GEMIN6Q8WXD5 167 aaKnown RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 FAM46AQ96IP4 442 aaKnown RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 KCNK17Q96T54 332 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 HOPXQ9BPY8 73 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 POLR2J2Q9GZM3 115 aaKnown RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 POLR2J3Q9H1A7 115 aaKnown RBP15.66■□□□□ 0.1
SHMT2-206ENST00000553529 RNF121Q9H920 327 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 DYNLRB1Q9NP97 96 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 MRGBPQ9NV56 204 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 ADA2Q9NZK5 511 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 RTTNQ86VV8 2226 aa15.66■□□□□ 0.1
SHMT2-206ENST00000553529 TRBV4-1A0A0J9YWV2 114 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 EFCAB9A8MZ26 197 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 SERPINA5P05154 406 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 THRBP10828 461 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 DAOP14920 347 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 SLC25A16P16260 332 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 ZNF32P17041 273 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 USF1P22415 310 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-206ENST00000553529 VLDLRP98155 873 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 SRSF2Q01130 221 aaKnown RBP15.65■□□□□ 0.1
SHMT2-206ENST00000553529 PRKCDQ05655 676 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 TRAM2Q15035 370 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 GKAP1Q5VSY0 366 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-206ENST00000553529 PODNL1Q6PEZ8 512 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 UGT2A3Q6UWM9 527 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 ZNF730Q6ZMV8 503 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 CCDC36Q8IYA8 594 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 ICA1LQ8NDH6 482 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 SLC30A7Q8NEW0 376 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 ZNF519Q8TB69 540 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 LZICQ8WZA0 190 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 GPA33Q99795 319 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 TXNIPQ9H3M7 391 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 CMAHPQ9Y471 501 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 FKBP7Q9Y680 259 aa15.65■□□□□ 0.1
SHMT2-206ENST00000553529 WNT9BO14905 357 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 STAMBPO95630 424 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 HPXP02790 462 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 BMP4P12644 408 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 SLC9A3P48764 834 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 DAP3P51398 398 aaKnown RBP15.64■□□□□ 0.09
SHMT2-206ENST00000553529 ZNF133P52736 654 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-206ENST00000553529 FXYD6P3P58550 94 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 DSCR9P59020 149 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 SGCAQ16586 387 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 IQCCQ4KMZ1 466 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 PABPC1L2AQ5JQF8 200 aa15.64■□□□□ 0.09
SHMT2-206ENST00000553529 SPATA46Q5T0L3 261 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms