RNA–Protein interactions for RNA: ENST00000553403.1

CCDC88C-205, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 1 (best) BASIC

Gene CCDC88C, Length 1,651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-205ENST00000553403 KLHL13Q9P2N7 655 aa23.59■■□□□ 1.37
CCDC88C-205ENST00000553403 KCNG2Q9UJ96 466 aa23.59■■□□□ 1.37
CCDC88C-205ENST00000553403 A0A0G2JK05 382 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 CDC20Q12834 499 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 ETFDHQ16134 617 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 TMEM176BQ3YBM2 270 aaPredicted RBP23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 ZNF468Q5VIY5 522 aaPredicted RBP23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 UEVLDQ8IX04 471 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 GDPD1Q8N9F7 314 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 PPP1R14BQ96C90 147 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 MAP6Q96JE9 813 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 OR8B4Q96RC9 309 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 SOSTQ9BQB4 213 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 B3GNT4Q9C0J1 378 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 TMEM185BQ9H7F4 350 aa23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 COA3Q9Y2R0 106 aaPredicted RBP23.58■■□□□ 1.37
CCDC88C-205ENST00000553403 A0A1W2PNR3 127 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 HPGDSO60760 199 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 KHDRBS3O75525 346 aaKnown RBP23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 CBR3O75828 277 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 RPP14O95059 124 aaKnown RBP23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 PSKH1P11801 424 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 RAB3BP20337 219 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 DLSTP36957 453 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 PSMD7P51665 324 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 SLC35A1P78382 337 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 C19orf57Q0VDD7 668 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 IDNKQ5T6J7 187 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 SFXN4Q6P4A7 337 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 PIP4P1Q86T03 277 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 MIB2Q96AX9 1013 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 TXNDC15Q96J42 360 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 LOC102725191A0A1B0GVB3 256 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 ZNF879B4DU55 563 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 ZFPL1O95159 310 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 PTTG1O95997 202 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 P04436 131 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 ZNF17P17021 662 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 FDX2Q6P4F2 183 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 TMPPEQ6ZT21 453 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 HDDC2Q7Z4H3 204 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 GLRX5Q86SX6 157 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 RAB43Q86YS6 212 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 OR8H2Q8N162 312 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 OXGR1Q96P68 337 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 GNRHR2Q96P88 292 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 UBL7Q96S82 380 aaPredicted RBP23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 ZCCHC4Q9H5U6 513 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 POLE4Q9NR33 117 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 MED29Q9NX70 200 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 SLCO1C1Q9NYB5 712 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 DKKL1Q9UK85 242 aa23.57■■□□□ 1.36
CCDC88C-205ENST00000553403 ZIC3O60481 467 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 PMS2P2O95744 297 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 RPS27P42677 84 aaKnown RBP23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 EVX1P49640 407 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 BIDP55957 195 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 ADAM8P78325 824 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 ROM1Q03395 351 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 TRIP6Q15654 476 aaKnown RBP23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 HSD17B12Q53GQ0 312 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 ACER2Q5QJU3 275 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 JMJD6Q6NYC1 403 aaPredicted RBP23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 OR5AK2Q8NH90 309 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 SETD6Q8TBK2 473 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 NSMAFQ92636 917 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 OR14A2Q96R54 314 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 FRRS1LQ9P0K9 344 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 SDK2Q58EX2 2172 aa23.56■■□□□ 1.36
CCDC88C-205ENST00000553403 RAD1O60671 282 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 ZNF432O94892 652 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 OPN1LWP04000 364 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 SPARCP09486 303 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 SFTPDP35247 375 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 THBS2P35442 1172 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 SLC17A1Q14916 467 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 TEX30Q5JUR7 227 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 B3GNTL1Q67FW5 361 aaPredicted RBP23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 CNIH2Q6PI25 160 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 KCTD18Q6PI47 426 aaPredicted RBP23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 MDGA2Q7Z553 956 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 ZNF679Q8IYX0 411 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 SLC26A10Q8NG04 563 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 OR2G2Q8NGZ5 317 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 FOXN4Q96NZ1 517 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 AMELYQ99218 206 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 KLHL9Q9P2J3 617 aa23.55■■□□□ 1.36
CCDC88C-205ENST00000553403 ANKRD61A6NGH8 418 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 AQP7P3A6NL99 342 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 NOTOA8MTQ0 251 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 SULT2B1O00204 365 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 OR10A3P58181 314 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 RASGEF1BQ0VAM2 473 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 WDFY1Q8IWB7 410 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 HSD17B8Q92506 261 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 RGP1Q92546 391 aaPredicted RBP23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 JSRP1Q96MG2 331 aaPredicted RBP23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 RBP7Q96R05 134 aa23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 MRPL13Q9BYD1 178 aaKnown RBP23.54■■□□□ 1.36
CCDC88C-205ENST00000553403 ELOVL3Q9HB03 270 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms